 |
Sequence Clip
•Base calling, vector and quality clipping from your raw sequence data (trace files) can be done by GabiPD. |
|
Blast
•Send your sequence data to GabiPD and BLAST searches against public or GabiPD sequence are done by GabiPD staff.
BLAST reports can be analyzed, e.g. identification of hits against certain genes, isolation of best BLAST hits etc. |
|
GenBank Submission
•All sequence data submitted to GabiPD can be reformated and prepared for GenBank submission by GabiPD staff. |
|
Affymetrix
•Affymetrix Identifier from the Affymetrix Arabidopsis chips are assigned to AGI gene code (TIGR5) by BLASTN.
Download the results from our webpage. |
|
Data Management
•GabiPD supports GABI participants to process and manage data. Output files from any programms can be analyzed and transfered to readable formats (e.g. MS EXCEL). |
| |
|
Contact
Birgit Kersten:
Tel.: +49-(0)331-567-8750
Axel Nagel:
Tel.: +49-(0)331-567-8751
|
| |
ImaGenes GmbH (successor of RZPD) plant materials and services: |
|
Affymetrix Screening:
• ImaGenes's Affymetrix GeneChip Expression Analysis Service hybridizes and analyses RNA samples using all currently available GeneChip Expression Arrays as well as CustomExpress Arrays.
Affymetrix Identifier from the Affymetrix Arabidopsis chip ATH1-121501 are assigned to AGI gene codes. Download the results. |
|
NimbleGen Microarrays:
• Gene expression analysis on NimbleGen Microarrays. |
|
Customized cDNA Microarrays:
• ImaGenes's Custom-made Microarray fabrication opens up the possibility to work with a defined subset of genes of interest. |
|
Arabidopsis cDNA clones
• Sequence-verified Arabidopsis cDNA clones are available.
Go to GreenCards to select clones by keyword search.
Download sequence information |
