A user-driven tool that displays large datasets (e.g. gene expression data from Arabidopsis Affymetrix arrays) onto diagrams of metabolic pathways or other processes.
MapMan was developed in cooperation with the group of Mark Stitt.
Description:
Originating from population (cms)HA342xARG1575-2 which segregates for downy mildew resistance,
two phenotypically contrasting cDNA bulks, BR (resistant bulk) and BS (susceptible bulk), were generated and used for 454 pyrosequencing. trimmed 454 reads for BR trimmed 454 reads for BS Assembly file
contains fasta sequences for 46881 isotigs > 499 nt assembled from BR and BS.
H = indicates barley (Hordeum) chromosomes A = indicates homoeologous chromosome set A of wheat (A of ABD) L = long arm of the respective chromosome S = short arm of the respective chromosome WCA = whole chromosome amplified Chinese Spring = wheat (Triticum aestivum) cultivar Betzes = barley (Hordeum vulgare ssp. vulgare) cultivar
This file contains a table in TAB delimited format with a non-reduntant collection of SNPs according to the references below. SNPs are mapped to cDNAs in the A. thaliana genome annotation version TAIR7.
Nordborg et al (2005) Clark et al (2007) Ossowski et al (2008)
