| We kindly ask users to cite the following paper when publishing results derived from the use of GabiPD: |
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| Diego Mauricio Riaño-Pachón, Axel Nagel, Jost Neigenfind, Robert Wagner, Rico Basekow, Elke Weber, Bernd Mueller-Roeber, Svenja Diehl and Birgit Kersten |
GabiPD: the GABI primary database – a plant integrative ‘omics‘ database |
| Nucleic Acids Research Advance Access 9/23/2008, DOI 10.1093/nar/gkn611. |
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News
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Archive
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About 2.800 Sugar beet ESTs from Sugar Beet Seed publicly available (28/10/08):
• A related publication is in press in BMC Plant Biology (E. Pestsova et al. 2008).
• Search for the data using GreenCards with the keyword "FG3*".
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A new version of MapMan desktop is available (15/09/08):
• This version (v2.2.0) is able to map gene expression data onto Arabidopsis chromosome maps, and includes a new simplified first-user interface.
Download
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Sugar beet GSS sequences from GABI BeetSeq publicly available (29/08/08):
• These 2.815 GSS (fosmid ends) from the sugar beet DH line KWS2320 were generated in the GABI BeetSeq project. The data have recently been published in Genome
(C. Lange et al. 2008).
• Please find the data via GreenCards searching for "IGS-SCF*".
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SATlotyper - a new software tool - available for download (07/08/08):
• SATlotyper is designed for inferring haplotypes and phased genotypes from unphased SNP data for polyploid and polyallelic heterozygous populations.
• This tool developed by the GabiPD team has recently been published in BMC Genomics.
(J. Neigenfind et al. 2008).
Download and more information
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New Gene GreenCard with NCBI UniGene information for all GabiPD sequences (07/08/08):
• Based on the best BLAST hit against Uniprot all GabiPD sequences are linked to the new Gene GreenCard with NCBI UniGene information and vice versa.
View an example
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