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Clone: MPIZp2001F131Q

Genotype (Genotype)
  species: Arabidopsis thaliana
  type: wildtype
  common name: thale cress
  cultivar: Wassilewskija-0 (Ws-0)
Library:
  lib name: MPIZp2001
  tissue: root
  cloning vector: pCMVSPORT6 site_1: SalI; site_2: Not1
  host: E. coli TOP10
  library description:
  cDNA library from Arabidopsis thaliana, accession Wassilewskija-0; roots from three weeks old plants grown on MS-plates at 26?C with 16 hours light/day; library was made at the Max-Planck-Institute for Plant Breeding Research, Cologne, Germany; cloning sites SalI-NotI, primer sites and orientation: SP6-SalI-CCACGCGTCCG-5prime-cDNA-polyA-CC-NotI-T7; GATEWAY compatible; Note: Sequencing granted in the context of the GABI Arabidopsis Verbund I: Genetic Diversity, "Establishment of high-efficiency SNP-based mapping tools and development of methods for genome-wide mutation detection" PI: Bernd Weisshaar Sequence submission managed by RZPD/GABI-Primary database: http://gabi.rzpd.de. This clone is available from RZPD; contact RZPD (clone@rzpd.de) for further information.

Related with
AT5G22440.1 annotated gene (TAIR7)
AT5G22440.2 annotated gene (TAIR7)
AT1G08360.1 annotated gene (TAIR7)
AT2G27530.2 annotated gene (TAIR7)
AT2G27530.1 annotated gene (TAIR7)
At.7367 unigene cluster
Bol.3778 unigene cluster
Bra.1732 unigene cluster
Bna.2003 unigene cluster
At.24240 unigene cluster
Bra.28765 unigene cluster
At.19006 unigene cluster
Bra.636 unigene cluster
Bra.1910 unigene cluster
Bna.15209 unigene cluster
Bol.1747 unigene cluster
Bna.4011 unigene cluster
Bol.5797 unigene cluster
Csi.5735 unigene cluster
Ccl.2011 unigene cluster
Ghi.18764 unigene cluster
Os.8864 unigene cluster
Tcc.1562 unigene cluster
Hv.5459 unigene cluster
Ghi.5769 unigene cluster
Mtr.2748 unigene cluster
Lsa.11335 unigene cluster
Lja.541 unigene cluster
Zm.138249 unigene cluster
Ppe.20380 unigene cluster
Lsa.14576 unigene cluster
Ghi.4846 unigene cluster
Han.5727 unigene cluster
Hv.12839 unigene cluster
Sbi.837 unigene cluster
Os.11487 unigene cluster
Zm.94920 unigene cluster
Sof.5084 unigene cluster
Tcc.3944 unigene cluster
Os.37672 unigene cluster
Bna.575 unigene cluster
Tcc.7897 unigene cluster
Vvi.9214 unigene cluster
Sbi.19782 unigene cluster
Les.19407 unigene cluster
Sof.20573 unigene cluster
Les.3112 unigene cluster
Nta.1653 unigene cluster
Pta.2091 unigene cluster
Mtr.7684 unigene cluster
Han.4573 unigene cluster
Hv.22922 unigene cluster
Zm.66965 unigene cluster
Han.1824 unigene cluster
Gma.6491 unigene cluster
Can.1546 unigene cluster
Can.3824 unigene cluster
Ppe.5428 unigene cluster
Psi.8134 unigene cluster
Pta.7598 unigene cluster
Lsa.5490 unigene cluster
Psi.6078 unigene cluster
Pgl.14502 unigene cluster
Can.679 unigene cluster
Pgl.4932 unigene cluster
Les.19882 unigene cluster
Pta.24201 unigene cluster
Gma.37744 unigene cluster
Stu.2362 unigene cluster
Ptp.5768 unigene cluster
Han.9639 unigene cluster
Pth.5660 unigene cluster
Ptp.11065 unigene cluster
AT5G22440.1 annotated gene (TAIR9)
AT5G22440.2 annotated gene (TAIR9)
AT1G08360.1 annotated gene (TAIR9)
AT2G27530.1 annotated gene (TAIR9)
AT2G27530.2 annotated gene (TAIR9)
249945_at Affymetrix representative on ATH1-121501
At5g22440 annotated gene (TIGR5)
At.7367 unigene cluster
 
Sequence: 51-L020166-066-001-F13-SP6P
submitter of sequence: Prof. Dr. Bernd Weisshaar
length: 773
priming: 5-prime
GenBankAc: CF652367 
51-L020166-066-001-F13-SP6P
GACCTTCCCA CACGTTGCAA ATTTGTTTCA GGGAGTACCA AAATGAGTAA GCTTCAGAGT         60
GAAGCCGTGA GAGAGGCAAT AAGCTCCATT ATCACTCACT GTAAGGAGAC AAAGCCACGC        120
AACTTCACTG AGACTATTGA ACTCCAGATT GGTCTCAAGA ACTATGACCC TCAAAAGGAC        180
AAGAGATTTA GCGGTTCAGT GAAATTGCCT CACGTTCCTA GGCCAAAGAT GAAGATTTGC        240
ATGCTTGGTG ATGCCCAGCA CGTCGAAGAG GCTGAGAAGA TTGGATTGGA ATCTATGGAT        300
GTTGAAGCTC TTAAGAAGTT GAACAAGAAC AAGAAACTTG TTAAGAAGCT TGCTAAGAAA        360
TTCCATGCTT TCCTTGCTTC TGAATCTGTC ATTAAGCAGA TTCCTCGTCT TCTTGGTCCT        420
GGTCTCAACA AGGCAGGAAA ATTCCCAACT CTTGTTAGCC ACCAAGAGTC TTTGGAATCC        480
AAAGTGAATG AGACAAAGGC AACAGTGAAG TTCCAGCTCA AGAAGGTTCT ATGTATGGGA        540
GTTGCTGTCG GTAATCTTTC CATGGAGGAG AAGCAGATCT TTCAAAATGT TCAGATGAGT        600
GTTAACTTCC TCGTTTCTCT CTTGAAGAAA AACTGGCAAA ATGTGAGGTG CTTGTACTTG        660
AAGAGCACAA TGGGTCCACC AAACCGAGTT TTCTAAGGTT ATTATTATTA CAAAGTTGCT        720
CTATGGCATC ATCACTCTTT AGGAAATTTG ATTTTCTGGT GCTGTCATGA GCC               773
TypePositionOrientation
ORF 1 - 693: forward
ORF 251 - 319: forward
ORF 365 - 484: forward
ORF 366 - 199: reverse
ORF 563 - 213: reverse
ORF 772 - 605: reverse
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