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Clone: MPIZp2000C062Q

Genotype (Genotype)
  species: Arabidopsis thaliana
  type: wildtype
  common name: thale cress
  cultivar: Achkarren-2 (Ak-2)
Library:
  lib name: MPIZp2000
  tissue: inflorescence
  cloning vector: pSPORT1 site_1: SalI; site_2: Not1
  host: E. coli TOP10
  library description:
  cDNA library from Arabidopsis thaliana, accession Achkarren-2; inflorescences from flower buds to young siliques; library was made at the Max-Planck-Institute for Plant Breeding Research, Cologne, Germany; cloning sites SalI-NotI, primer sites and orientation: T7-SalI-CCACGCGTCCG-5prime-cDNA-polyA-CC-NotI-SP6; Note: Sequencing granted in the context of the GABI Arabidopsis VerbundI: Genetic Diversity, "Establishment of high-efficiency SNP-based mapping tools and development of methods for genome-wide mutation detection" PI: Bernd Weisshaar; Sequence submission managed by RZPD/GABI-Primary database: http://gabi.rzpd.de This clone is available from RZPD; contact RZPD (clone@rzpd.de) for further information.

Related with
AT1G08360.1 annotated gene (TAIR7)
AT5G22440.2 annotated gene (TAIR7)
AT5G22440.1 annotated gene (TAIR7)
AT2G27530.1 annotated gene (TAIR7)
AT2G27530.2 annotated gene (TAIR7)
At.19006 unigene cluster
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Bna.575 unigene cluster
Bol.1747 unigene cluster
Bra.1910 unigene cluster
At.24240 unigene cluster
Bol.5797 unigene cluster
Bna.4011 unigene cluster
Bra.28765 unigene cluster
Bna.15209 unigene cluster
At.7367 unigene cluster
Sbi.837 unigene cluster
Zm.66965 unigene cluster
Sof.20573 unigene cluster
Hv.12839 unigene cluster
Zm.94920 unigene cluster
Tcc.1562 unigene cluster
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Ghi.5769 unigene cluster
Csi.5735 unigene cluster
Can.679 unigene cluster
Sof.5084 unigene cluster
Ccl.2011 unigene cluster
Mtr.2748 unigene cluster
Tcc.7897 unigene cluster
Ghi.4846 unigene cluster
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Os.11487 unigene cluster
Hv.22922 unigene cluster
Can.1546 unigene cluster
Zm.138249 unigene cluster
Sbi.19782 unigene cluster
Hv.25032 unigene cluster
Ghi.18764 unigene cluster
Nta.6843 unigene cluster
Mtr.7684 unigene cluster
Han.5727 unigene cluster
Sbi.18712 unigene cluster
Vvi.9214 unigene cluster
Ppe.5428 unigene cluster
Lja.14656 unigene cluster
Lja.541 unigene cluster
Han.9639 unigene cluster
Bna.2003 unigene cluster
Lsa.11335 unigene cluster
Hv.5459 unigene cluster
Ppa.3917 unigene cluster
Gma.6491 unigene cluster
Mtr.17728 unigene cluster
Lsa.14576 unigene cluster
Mtr.16898 unigene cluster
Han.5402 unigene cluster
Nta.381 unigene cluster
Han.1824 unigene cluster
Han.4573 unigene cluster
Ppe.20380 unigene cluster
Les.19882 unigene cluster
Lsa.5490 unigene cluster
Gma.37744 unigene cluster
Vvi.7697 unigene cluster
Pta.2091 unigene cluster
Psi.6078 unigene cluster
Pgl.14502 unigene cluster
AT2G27530.1 annotated gene (TAIR9)
AT2G27530.2 annotated gene (TAIR9)
AT1G08360.1 annotated gene (TAIR9)
AT5G22440.1 annotated gene (TAIR9)
AT5G22440.2 annotated gene (TAIR9)
At.19006 unigene cluster
266210_at Affymetrix representative on ATH1-121501
At2g27530 annotated gene (TIGR5)
 
Sequence: 18-E014659-035-002-C06-T7R
submitter of sequence: Prof. Dr. Bernd Weisshaar
length: 539
priming: 5-prime
GenBankAc: CB265012 
18-E014659-035-002-C06-T7R
GCTTTCTTCA CCATTCAGGA TCAGAGATTC GTGACCTGAG AAGACACTCA ATATGAGTAA         60
GCTTCAGAGT GAGGCTGTTA GAGAAGCCAT AACGACTATC AAGGGAAAAT CTGAGGAGAA        120
GAAGCGTAAC TTTGTTGAGA CAGTGGAGCT TCAGATTGGT CTGAAGAACT ATGACCCACA        180
AAAGGATAAG CGTTTCAGTG GATCTGTGAA GCTCCCACAT ATTCCTCGCC CAAAAATGAA        240
GATCTGTATG CTTGGAGATG CTCAGCATGT TGAGGAGGCA GAGAAAATGG GACTTAGTAA        300
CATGGATGTT GAGGCTTTGA AAAAGCTTAA CAAGAACAAG AAGCTTGTTA AGAAGCTTGC        360
TAAGTCTTAC CATGCTTTCT TGGCTTCTGA GTCTGTCATT AAGCAGATTC CTCGTCTTCT        420
TGGTCCTGGT CTTAACAAGG CAGGAAAGTT CCCAACACTT GTGAGTCACC AAGAGTCATT        480
GGAAGCAAAG GTGAATGAGA CCAAAGCAAC AGTGAAGTTC CAGTTGAAGA AAGTTCTGT         539
TypePositionOrientation
ORF 53 - 538: forward
ORF 372 - 461: forward
ORF 373 - 11: reverse
ORF 537 - 469: reverse
ORF 539 - 435: reverse
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