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Gene: LOC_Os01g01010.1


  Alternative name:13101.m00001

Genotype (Genotype)
  species: Oryza sativa japonica
  name: (Japanese rice)
  type: wildtype

Gene function:
protein TBC domain containing protein, expressed (TIGR 6.1)

Gene Ontology
GO termIdentifierType
mitochondrionGO:0005739cellular component

Related with
Xa21_454_19974 cDNA clone
Xa21_454_26658 cDNA clone
Xa21_454_37437 cDNA clone
Xa21_454_14136 cDNA clone
HZ65D18 cDNA clone
HO30K09 cDNA clone
Contig20226_at Affymetrix representative on Barley1

Orthologues and co-orthologues identified by INPARANOID
AT2G43490.4 Arabidopsis thaliana
POPTR_0017s05160.2 Populus trichocarpa

External resources
Michigan State University - Rice Genome Annotation
Aramemnon
Gramene
PlnTFDB
iHOP (13101.m00001)
 
Sequence: LOC_Os01g01010
submitter of sequence: public data
length: 7915
description: genomic sequence (MSU 6.1)
LOC_Os01g01010
AGATGAGCTG GTGGGGATGC TCTAAGAGAA CGAGAGAAGC ACAGAGCAGA TAAACCACAC         60
CCACAGGCAC CACCGTCCTT GTTGGTAATG AAGAAGACGA GACGACGACT TCCCCACTAG        120
GAAACACGAC GGAGGCGGAG ATGATCGACG GCGGAGAGAG CTACAGAAAC ATCGATGCCT        180
CCTGTCCAAT CCCCCCATCC CATTCGGTAG TTGGATTGAA GACTACCGAA TAAGAGAAGC        240
AGGCAGGCAG ACAAACCCTT GAACCAAGGA GTCCTCGCTG AGGAAGCTTT GGATCCACGA        300
CGCAGCTATG GCCTCCCCGC CCACCAGGCC GCCAGCCACA ACCAGCTGAC TAGGTAGGCT        360
TCCTAGGTAG GGATCCCATC CCTTCGATTC CCTACTCCCT CCCCCGATTG ATTTGATTTG        420
ATTTGATTTA ATTCGATTGC CTGCTTTTCA GGTCGCATGC ATCATCAGAT TTCAATCTCC        480
CTTCGTTCCC TGTCCCTAAT CCAATACCAA TAGGGAGCAA TCAGCTGCTC CTCGACGGCG        540
AGGGAGATGT CGTCGGCCGC GGGCCAAGAC AACGGAGATA CCGCTGGGGA CTACATCAAG        600
TGGATGTGCG GCGCCGGTGG CCGTGCGGGC GGCGCCATGG CCAACCTCCA GCGCGGCGTT        660
GGCTCCCTCG TCCGTGACAT TGGCGACCCC TGCCTCAACC CATCCCCCGT TAAGGTTCGC        720
CTACTCCTAC TCTAGCTCCA TATGGATATG GATTCGATTA GCTGTCTACA TTCTATGCCA        780
TCAATTTGTT TTCCATCACT TCTCATTATA CATCTCCATT GCTCTCTAAA TTAAGGCTTC        840
TCTAGCTCTA TCCTATATAT ATACTAGTAC TCCGTATATG ATTCTGCTTC ATCACTTATT        900
TATTCATCAT CATACCGTGA AGCTGTATAA GTCCTGTTAT TTGTCATTTG GCATATGTTG        960
TATAGATAAC ACTTTCAGCC CAGGGACTTT CTATTGCCAC TTTTATACAT ATACAATCAA       1020
CATTTAGCAT ATGTATATCC TGTACCGCTC AGTTGTACTG CTGCTTTGAA GATAATGTTT       1080
GCAAAACATA TGAGCTCACA CACGAGGCTA GATGCTGCAT AGGCTGCACA ATGGGGTAGC       1140
CATTTTGATA CTTCTTAATG CTATTTATGC TGGTCCAAAT GTTCATTGGT AGCCTCAGGC       1200
AGAGAATTTT AGGGAGATAT TATGTCAAAC TCCCTGGATT CACTATGATT ATACAATATT       1260
ACCCATTCAA TCCATTCAAA TAAATTTCCA GGTCAACTCA CATATTGTAC TGAAAGAAGA       1320
CTAATTTGCA CTAATCATAT CCTTTTATCC ACCAGAGTAT ATGAGATTGT CTTCTATATG       1380
CAATTTACTT CATATCGACA TTTTTCTGCA GAATTGCAAA ACTGACGCCT TGTTTTCCAT       1440
CTGGAATTGT GCAGGGGAGC AAAATGCTCA AACCGGAAAA ATGGCACACA TGTTTTGATA       1500
ATGATGGAAA GGTCATAGGT TTCCGTAAAG CCCTAAAATT CATTGTCTTA GGGGTGAGTT       1560
AATTGTTTCT TTTGTGCTTC AAAAACTTGT TTTTTCATGT ATTTTAGCTG TTGAAGGGTG       1620
TGGATTTTTT TTTCAGTCTT AATACATTAC CTTTTAGAGC ATGATGCCCC ACGCGCCATT       1680
TGTGAATGTG TAAAATAGGG AAGATCAAAT AGAACGTGAC AACTGTTTAT TTTATTACCA       1740
TGATCATTGT TCTCTTTGAG AGTGTCTGCT TTGGAAATTT CAAAGAAATT AATGCATATG       1800
ATTGCGTAGC TCTAGTTTTT CTTAAAAAAA TAAGCGGCTA GGCTCTTTAT ACTATTATGT       1860
CACAGAGTGT TTGCCTTTTA CCTGTGTATG TAGCTAGGCA TAAACATTTG TTTGTGGGTA       1920
AATACAAAAA AAAATCCAAT GTGTAGAAAC TGCTTATAAA TACATAAAAG TTACATAAAT       1980
ACATAACTGC TTCAAATAAG CAAGATTTGA ACATACCTTC ACATAAGCTT TCCCCTAACT       2040
GAAAAGCCAT TTGGTATAAC CTTATAGAAA TTAGATATAG TGGAGATGTG GAATGAGCTG       2100
CTATCAAGTC TTGTTTCGTG AAAGCAAACT GACACGGTCT CCACAGCAAA CACGTCCACA       2160
GCTTTGCAAT TAGTATCTTT ATAGGAAGGT CAATCAGAGT TCATTGGCCA TATCTTGGAA       2220
AAAAAAGGCA TCAGATTTTA GTTTAATTAT GTCTATATTT TAGGCATGGA TTATTGATCA       2280
TTTTTGCAGC AGACTAAGTT TAATGCATGT AGTTATTTTC CTTGATTAGT GATTAGTGTT       2340
GTTATTTTCT ATACACCACT GGCACTGATA GATGTGCTCC ATGCTTTGCA ATGCATCAAA       2400
ATTATCATAT CGTGCCTAAC TCATGCTTTG CACAGATATC ATTTTTTTGT GTTCTGGCAC       2460
TATCTAAAGA ATTGTCTATA AACTAGGAAC AATAAGATCG CATCGTACTA TTCTTCACAT       2520
TAAAACATTT CTTACCCCCA AAATTGATGT GCAGGGTGTG GATCCCACTA TTCGAGCTGA       2580
AGTTTGGGAA TTTCTTCTTG GCTGCTATGC CTTGAGTAGT ACCTCAGAGT ATAGGAGGAA       2640
ACTAAGAGCT GTTAGAAGGT TTGACACTTT CCTGTTTTCA GTACCAGGAT ACCTTTTTTG       2700
TACAAGCATA AGACCGTAAG AGCATAAATG AATTGCATTT ATTATCTAGA ATAAAATCAT       2760
GAATGTTACA GTTATGTAGT ACTCCCTCCA TTCCAATATA TAAGGATTTC AAGGATTCAA       2820
ATTTTGTACC ACAATATAAG GATTTCTGCA CTGATTCCCA TAATACCCAT CATTTCAGTG       2880
ATTCCCAAAC CAATCAAATG CATAGAAAGG GAAAAGAATC TTTTGACCTA ACCTTGGTAT       2940
TGGCTAAACA ACCTAGAAAT CTTTATATTT TGGAAAGGAG GGAGTAGGTA TTAATTTGTT       3000
TGTTTTTTGT TTATTGTACT AAAACTGAAC TTCTAGGTAA ATATTCCTAT CCTTTACATT       3060
TTCCTTGTGT TATTTATAAC CATGTGTGCA GAATGGAAAA TGATATTAAA AGTTTAAAAC       3120
AAATGTGTTG CTATGTTTAT CTGGAGTACC AATCTCAATC TTTTTCAGGC ACTCAAAGTA       3180
ACTTGATTAG GGTTTAGGGT TTACCCCTTT TCATTGTGCT ACCTCCTATA CACATTGTTG       3240
GGGGGATGAA TTGGTGGCAT CAGTACTCAT AGTTTGTCTA TGTAACATCT ACTTGTGCTG       3300
ATGTTGTATG ATCCATTTGG TTTAGATGGC TTGATAAGTA CCCCGTGCCT GCACACAACA       3360
ATATGACAGA TTATATCAAT ACATCTAGGG TAGAGGTAAA TGAAAGACTG AGATTCTAGA       3420
TATTGCATAC AATTCCTAGG TATTTGTGGT CATGGCCTGT GGGTGATATC GGGTTGGATA       3480
TGATCCACCA AACCTGGAGC AGAAAATTTC TAAGACTAGT TGCCAGAATA GAATTCTCTT       3540
GGAAATTTAA CAGTTCCAAA CAGCCTGTTC ACAAACCCAT TATCCATTCA CTAGCAGGTG       3600
CTGGACAGAA AATATGTTGT TCATAGGGGT TTGAACCTGG GACATTAAAT TCTGTAGTAC       3660
GTGGTAGCCA ACAGTGCCAA TGGCTCTTTC TTTGTAATGG AAGGATGCGT ATTAAAGAAA       3720
TTAAGTAGAT GGGTTGGCAT TGCACACTAA TTAGTAATGC AAATATACCT TAGTTTATTG       3780
TGATCTCTGT AATTATAATT GCATATTTAT ATTCCTTTTT ATGTCTAACT ATCGAAGCGT       3840
ACCTGTGCTA TTACAGATAA ACTTATTACG TCATATGTTC ATGTTGAATT GATTGGCGTG       3900
CGATTAGTCC TTTCTGTTTG CATCTGCTTG TTTTATTCAC TTGTGACCAA CAAATTTATA       3960
ACCAACATCA TGTATGCCAT CCATACCAAT TGTTGTGCGA GAAATTCTAC GTTTTGCCTT       4020
TGTTACCGAT TCTACTAATT GTTGCTGATG AATGCGAATT CCGTGAAATG CCATCGCACA       4080
AGTGTTTTTA TTCCTTTGTT TCCATTTCTA CGGAGCAGGG CAATCAGTAC AGTTCTGAAA       4140
TTCTTGCTGA GTGTTCTTTC TTTTGAAAGT TTTTACACCT GTGGGACAAT TATGGAAGCC       4200
TGTAACCTCG TTTATTTCTT CGCTTCTATG CAGGGAAAAA TATCAAATTT TAGTTAGACA       4260
GTGCCAGAGC ATGCACCCAA GCATTGGTAC AGGTGAGCTT GCTTACGCTG TTGGATCAAA       4320
GCTAATGGAT GTCAGGACTA TGTCAAAAGA AACCCACATT GCAGAAGAAG TTAGCACAAG       4380
TCAACAAACT TCACAAAATA CAGCTGGCAG TTTAGTAGAA GATTCAGATT ATGGCCCCGG       4440
TGGTGCACAG CAGTCACAAA AAAGGGAAAG CTGTAGTAAA TCAGCTGAAC TAGTTGGTTT       4500
CAACGTACAT AATGATACCT CTCTTTATGA TTCTTCCAAT TTTATTGTGT CTTCTACAGA       4560
AGTGAATAAT TGCTCAAAAG ATTCTCAGGA TTACAATGAC ATGGGTGAAC CAAGATATGA       4620
CACTGAGACC TTCGATGATT ATCCTTCTCT ACCTGTTACA AATTTTTTCT CAACTGATGG       4680
TGTGGGCAGC AATGGAGTTG ATAAAAATCA TTGTAGTTTC TCAGTTCCTG AAGATAGATT       4740
AAGGCACCGT GATGAACGTA TGCACAGCTT CCAAATCAAT AATAACATAG ATCTCATTAT       4800
AGAGTCAAAT TCATGCTCCA GTGATGTGTT TAGGGCTAGC AACAGTGATT CAGCCATCTT       4860
TCACTCAGAT GCATACAAGC AGGATAGATG GTTAGATGAT AATGGCTATA ACAGGGAAGT       4920
TATAGATTCC TTGAGGATAT CTGATGCACC AGAAGCAGAT TTTGTTGATG GAACCAAATC       4980
CAACAGTGTG GTTGCCAGCA AAGATCGAGT CTCTGAATGG CTTTGGACAC TGCACCGAAT       5040
TGGTATGCTC TATTTTTTCT TCACTTCATC ATGCAATTAC AGTGGTATCT TGTGATTATG       5100
TTCTAATTTG CAAAACCTAT TACAGTGGTT GATGTGGTTA GAACGGATAG TCATCTTGAT       5160
TTCTATGGAG AATCAAGAAA TATGGCTAGG ATGTCAGATA TACTTGCAGT TTATGCATGG       5220
GTTGATCCTT CCACCGGGTA TTGCCAAGGT ATATGCATAT TTCAGTGGCA TCTTTTTTTA       5280
CTTCCTTTTT GGTTTCTTGA TGTGTCTAAA TGGGATAAGT TGCTAACAGG TATGAGTGAT       5340
CTACTTTCAC CTTTTGTTGT TCTCTATGAG GATGATGCAG ATGCCTTTTG GTGCTTTGAG       5400
ATGCTACTGA GAAGGATGGT AATTCACATA TATTTCAAAT TTTGTTGCCT ATTAGTTTGG       5460
TTTCTATGTT ACTCCATGCA TAATATGTGC CCTGTTCCAC TTCAGCGTGA AAATTTCCAG       5520
ATGGAGGGAC CAACAGGAGT TATGAAGCAG TTGCAAGCAT TGTGGAAGAT CATGGAAATA       5580
ACTGATGTAG AATTATTTGA ACATTTGTCA ACAATTGGTG CTGAAAGCCT TCATTTTGCT       5640
TTCCGGATGC TGCTAGTGCT TTTTCGTCGA GAGCTGTCCT TTGAGGAGTC ACTTAGCATG       5700
TGGGAGGTGT GGCATTTGAA GACACATGTA TTATCTTTTT TCAGTTGTTG TTCTTCGTAG       5760
GAAAGCTCTA ATGGATGTTT GTTTGTCAGC TGGTGTAGGT CTAGGGGATG TTGGTTAAGC       5820
CTTTTTTATT TCAAAAATTG TATTACTAGT TAAATATTTC AAATAGTAAA ATAGGGTACA       5880
TCTTCGATTT AGGTTCAAAA TCATCAGAGG TGTAGGTAGA TGGTTCATTA CGATTGTAGT       5940
TAATGTTTGT GATATCATGT GGCATGTGAA CTTTATACTC CCTCGGGTCA CAAATATTTG       6000
ACGTTTAGGA CAAGATGTGG TCAAACTTTT AAAATTTTGA CCGTCAATAA CAGCTCAAAT       6060
GCGTAGCTTA TAAAAACACA AAAAAAGATA TGCGGAGATT TGCCTTGCAA GGTATTAGTG       6120
TCATAATATG ATACACTTAT TAGATTTTAT AGTCTTATTC TGATATAAAA TTGATGGTCA       6180
GTTTCAAAAG TTTTGACCAA ATCTTGTTCT AAACATCAAA TATTTATGAT CGGAGGGAAC       6240
ATTACTTATA AAATGCTCTT CACACTGCAG TCTTGATCTG TTAACCAACC GTGCTTCTTG       6300
CTTTCAGATG ATGTGGGCTG CTGACTTTAA TGAAGATGTG ATTTTACATT TGGAAGAGAA       6360
TTGTCTGGAG CCATTGCTGG TAGATATGAG GAATGATTTA TCATGTGAGG TGAAAGAAGA       6420
GCACCGGGTG AACAGTTACA CAAGAAGAAA GTCCAAAAGC AGGAAGCCCC ATCATAGAAA       6480
TGGTGAAATG CGTGTAGCTT GCAACCTTGG AATGAAACCC AATACAAGAA ATCCCCTCTG       6540
TGGCTTGTCA GGAGCTACTA TTTGGGCAAG ACATCAGCAG ATGCCACATA TAAGCACAAA       6600
TGTGTTAGCA AAGAATGGAG ATGATGATCT GCCTATATTC TGCGTAGCAG CAATCCTTGT       6660
AATCAATCGC CACAAGATAA TTAGAGAAAC TCGCTCAATA GATGATGCAA TCAAGGCAAG       6720
TTTAAGTCAC AACTTCCTTT CATATTGTTT ACAAACCTCG GATCCATGAA ATTACTACCA       6780
AGAGTTACCT ATATTTGCAT TAGATTTTGT GGAATTCATT TTAGGCAAAA TTAAAAATTT       6840
GCTCAGACAG TACAATAACA TGTTATGGCC GATCATTTCT GCATAAATGA CTATTGATTT       6900
TGTCCTCTGC TGAATTGATG GGTTTAATTA GAGGATGCTT ATTTCATTCT GATAACTATC       6960
AATATTTACA AGTTACGGCA ACTGCTAATT AAAAATGATG CCCAGCCTTT CTCCCTCTTG       7020
GAAAAAAAGA TGGGTAAACC TGTATATAGT GGTGATATTG ACTCTGCTGA GCAGTCTTCC       7080
ACTTAAATGG GAAGAGTTAA GGAAAGTATA GTCAGGTTTA CTTATAATGC AACTTATTGG       7140
CATATTAATG CATGTTTATT GTTTGCACTC CTGAAGTTGA GTTGGTCAAT TTTTTCCATA       7200
GATGTTCAAT GATAATATGC TGAAGATCAA TGTAAAAAGA TGCGTACGCA TGGCTATCAA       7260
GCTGAGGAAG AAGTATATTT ACAAGGTAAA TTGTGATAAG CATACATGAG CACCATCCAT       7320
GTTTTTCAGG TATATTTACA AGGTAAGTTC TAATTTGGTC TTGGGATACA GTTATTGAAG       7380
GGGGGCTCGG AATGATGAAA AAGTGGAAAC TGAAGTTGAG AAATCGCCCT GGGGAACTAG       7440
ATGTTTTTCA ACCATGAACT TCTCGTAATT ATGGGTGATG GAACTTTATA TATTCATTAG       7500
AAGTCCAAAA AAAATCCGTA TACTCACGGT ATGGATTCCC TCTTTCTGTT TATGTTTTGT       7560
TAGAGATGGA TGACGTACAT AATCTGCTTG TCTTGTTTCA GGGAATCTGT ACATATGCAC       7620
AGTATACTTG AAAACAAGAG ACGAAGCGGT GGAAGGATAA TAGAGAAGAC CGCCATGTTG       7680
GTGTAGCATC GATCGATGTT GTCATTGTTT TTGTGGTGCC AGCCCATCTG CCTTGGCACT       7740
TTCCGTGGTG ATTTCTGATA AAAGTGGAGT ACTAGTTGTT TTTTCTTTTT GCCAAACAAT       7800
TTGCGTCAGC TATTGGTGGA GAGAGAAGGA ATGAATGAGG AATGTGTATA AAGCACTAGT       7860
GGTAATCACG CAGTCGTTTC AATACAGAAC AGTAAAAAAT GGAGGAATTC TGCCA            7915
 
Sequence: LOC_Os01g01010.1
submitter of sequence: public data
length: 703
description: amino acid sequence (MSU 6.1)
LOC_Os01g01010.1
MSSAAGQDNG DTAGDYIKWM CGAGGRAGGA MANLQRGVGS LVRDIGDPCL NPSPVKGSKM         60
LKPEKWHTCF DNDGKVIGFR KALKFIVLGG VDPTIRAEVW EFLLGCYALS STSEYRRKLR        120
AVRREKYQIL VRQCQSMHPS IGTGELAYAV GSKLMDVRTM SKETHIAEEV STSQQTSQNT        180
AGSLVEDSDY GPGGAQQSQK RESCSKSAEL VGFNVHNDTS LYDSSNFIVS STEVNNCSKD        240
SQDYNDMGEP RYDTETFDDY PSLPVTNFFS TDGVGSNGVD KNHCSFSVPE DRLRHRDERM        300
HSFQINNNID LIIESNSCSS DVFRASNSDS AIFHSDAYKQ DRWLDDNGYN REVIDSLRIS        360
DAPEADFVDG TKSNSVVASK DRVSEWLWTL HRIVVDVVRT DSHLDFYGES RNMARMSDIL        420
AVYAWVDPST GYCQGMSDLL SPFVVLYEDD ADAFWCFEML LRRMRENFQM EGPTGVMKQL        480
QALWKIMEIT DVELFEHLST IGAESLHFAF RMLLVLFRRE LSFEESLSMW EMMWAADFNE        540
DVILHLEENC LEPLLVDMRN DLSCEVKEEH RVNSYTRRKS KSRKPHHRNG EMRVACNLGM        600
KPNTRNPLCG LSGATIWARH QQMPHISTNV LAKNGDDDLP IFCVAAILVI NRHKIIRETR        660
SIDDAIKMFN DNMLKINVKR CVRMAIKLRK KYIYKLLKGG SE*                          703
 
Sequence: LOC_Os01g01010.1
submitter of sequence: public data
length: 2109
description: coding sequence (MSU 6.1)
LOC_Os01g01010.1
ATGTCGTCGG CCGCGGGCCA AGACAACGGA GATACCGCTG GGGACTACAT CAAGTGGATG         60
TGCGGCGCCG GTGGCCGTGC GGGCGGCGCC ATGGCCAACC TCCAGCGCGG CGTTGGCTCC        120
CTCGTCCGTG ACATTGGCGA CCCCTGCCTC AACCCATCCC CCGTTAAGGG GAGCAAAATG        180
CTCAAACCGG AAAAATGGCA CACATGTTTT GATAATGATG GAAAGGTCAT AGGTTTCCGT        240
AAAGCCCTAA AATTCATTGT CTTAGGGGGT GTGGATCCCA CTATTCGAGC TGAAGTTTGG        300
GAATTTCTTC TTGGCTGCTA TGCCTTGAGT AGTACCTCAG AGTATAGGAG GAAACTAAGA        360
GCTGTTAGAA GGGAAAAATA TCAAATTTTA GTTAGACAGT GCCAGAGCAT GCACCCAAGC        420
ATTGGTACAG GTGAGCTTGC TTACGCTGTT GGATCAAAGC TAATGGATGT CAGGACTATG        480
TCAAAAGAAA CCCACATTGC AGAAGAAGTT AGCACAAGTC AACAAACTTC ACAAAATACA        540
GCTGGCAGTT TAGTAGAAGA TTCAGATTAT GGCCCCGGTG GTGCACAGCA GTCACAAAAA        600
AGGGAAAGCT GTAGTAAATC AGCTGAACTA GTTGGTTTCA ACGTACATAA TGATACCTCT        660
CTTTATGATT CTTCCAATTT TATTGTGTCT TCTACAGAAG TGAATAATTG CTCAAAAGAT        720
TCTCAGGATT ACAATGACAT GGGTGAACCA AGATATGACA CTGAGACCTT CGATGATTAT        780
CCTTCTCTAC CTGTTACAAA TTTTTTCTCA ACTGATGGTG TGGGCAGCAA TGGAGTTGAT        840
AAAAATCATT GTAGTTTCTC AGTTCCTGAA GATAGATTAA GGCACCGTGA TGAACGTATG        900
CACAGCTTCC AAATCAATAA TAACATAGAT CTCATTATAG AGTCAAATTC ATGCTCCAGT        960
GATGTGTTTA GGGCTAGCAA CAGTGATTCA GCCATCTTTC ACTCAGATGC ATACAAGCAG       1020
GATAGATGGT TAGATGATAA TGGCTATAAC AGGGAAGTTA TAGATTCCTT GAGGATATCT       1080
GATGCACCAG AAGCAGATTT TGTTGATGGA ACCAAATCCA ACAGTGTGGT TGCCAGCAAA       1140
GATCGAGTCT CTGAATGGCT TTGGACACTG CACCGAATTG TGGTTGATGT GGTTAGAACG       1200
GATAGTCATC TTGATTTCTA TGGAGAATCA AGAAATATGG CTAGGATGTC AGATATACTT       1260
GCAGTTTATG CATGGGTTGA TCCTTCCACC GGGTATTGCC AAGGTATGAG TGATCTACTT       1320
TCACCTTTTG TTGTTCTCTA TGAGGATGAT GCAGATGCCT TTTGGTGCTT TGAGATGCTA       1380
CTGAGAAGGA TGCGTGAAAA TTTCCAGATG GAGGGACCAA CAGGAGTTAT GAAGCAGTTG       1440
CAAGCATTGT GGAAGATCAT GGAAATAACT GATGTAGAAT TATTTGAACA TTTGTCAACA       1500
ATTGGTGCTG AAAGCCTTCA TTTTGCTTTC CGGATGCTGC TAGTGCTTTT TCGTCGAGAG       1560
CTGTCCTTTG AGGAGTCACT TAGCATGTGG GAGATGATGT GGGCTGCTGA CTTTAATGAA       1620
GATGTGATTT TACATTTGGA AGAGAATTGT CTGGAGCCAT TGCTGGTAGA TATGAGGAAT       1680
GATTTATCAT GTGAGGTGAA AGAAGAGCAC CGGGTGAACA GTTACACAAG AAGAAAGTCC       1740
AAAAGCAGGA AGCCCCATCA TAGAAATGGT GAAATGCGTG TAGCTTGCAA CCTTGGAATG       1800
AAACCCAATA CAAGAAATCC CCTCTGTGGC TTGTCAGGAG CTACTATTTG GGCAAGACAT       1860
CAGCAGATGC CACATATAAG CACAAATGTG TTAGCAAAGA ATGGAGATGA TGATCTGCCT       1920
ATATTCTGCG TAGCAGCAAT CCTTGTAATC AATCGCCACA AGATAATTAG AGAAACTCGC       1980
TCAATAGATG ATGCAATCAA GATGTTCAAT GATAATATGC TGAAGATCAA TGTAAAAAGA       2040
TGCGTACGCA TGGCTATCAA GCTGAGGAAG AAGTATATTT ACAAGTTATT GAAGGGGGGC       2100
TCGGAATGA                                                               2109
 
Sequence: LOC_Os01g01010.1
submitter of sequence: public data
length: 3017
description: cdna sequence (MSU 6.1)
Sequence features and Clone alignments (BLAST):
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Gene structure   UTR    start codon    stop codon    exon-exon border 
Clone alignments   forward    reverse    start    stop 
Protein domains   domain       
Click on sequence features to obtain additional information.
LOC_Os01g01010.1
AGATGAGCTG GTGGGGATGC TCTAAGAGAA CGAGAGAAGC ACAGAGCAGA TAAACCACAC         60
CCACAGGCAC CACCGTCCTT GTTGGTAATG AAGAAGACGA GACGACGACT TCCCCACTAG        120
GAAACACGAC GGAGGCGGAG ATGATCGACG GCGGAGAGAG CTACAGAAAC ATCGATGCCT        180
CCTGTCCAAT CCCCCCATCC CATTCGGTAG TTGGATTGAA GACTACCGAA TAAGAGAAGC        240
AGGCAGGCAG ACAAACCCTT GAACCAAGGA GTCCTCGCTG AGGAAGCTTT GGATCCACGA        300
CGCAGCTATG GCCTCCCCGC CCACCAGGCC GCCAGCCACA ACCAGCTGAC TAGGTAGGCT        360
TCCTAGGTCG CATGCATCAT CAGATTTCAA TCTCCCTTCG TTCCCTGTCC CTAATCCAAT        420
ACCAATAGGG AGCAATCAGC TGCTCCTCGA CGGCGAGGGA GATGTCGTCG GCCGCGGGCC        480
AAGACAACGG AGATACCGCT GGGGACTACA TCAAGTGGAT GTGCGGCGCC GGTGGCCGTG        540
CGGGCGGCGC CATGGCCAAC CTCCAGCGCG GCGTTGGCTC CCTCGTCCGT GACATTGGCG        600
ACCCCTGCCT CAACCCATCC CCCGTTAAGG GGAGCAAAAT GCTCAAACCG GAAAAATGGC        660
ACACATGTTT TGATAATGAT GGAAAGGTCA TAGGTTTCCG TAAAGCCCTA AAATTCATTG        720
TCTTAGGGGG TGTGGATCCC ACTATTCGAG CTGAAGTTTG GGAATTTCTT CTTGGCTGCT        780
ATGCCTTGAG TAGTACCTCA GAGTATAGGA GGAAACTAAG AGCTGTTAGA AGGGAAAAAT        840
ATCAAATTTT AGTTAGACAG TGCCAGAGCA TGCACCCAAG CATTGGTACA GGTGAGCTTG        900
CTTACGCTGT TGGATCAAAG CTAATGGATG TCAGGACTAT GTCAAAAGAA ACCCACATTG        960
CAGAAGAAGT TAGCACAAGT CAACAAACTT CACAAAATAC AGCTGGCAGT TTAGTAGAAG       1020
ATTCAGATTA TGGCCCCGGT GGTGCACAGC AGTCACAAAA AAGGGAAAGC TGTAGTAAAT       1080
CAGCTGAACT AGTTGGTTTC AACGTACATA ATGATACCTC TCTTTATGAT TCTTCCAATT       1140
TTATTGTGTC TTCTACAGAA GTGAATAATT GCTCAAAAGA TTCTCAGGAT TACAATGACA       1200
TGGGTGAACC AAGATATGAC ACTGAGACCT TCGATGATTA TCCTTCTCTA CCTGTTACAA       1260
ATTTTTTCTC AACTGATGGT GTGGGCAGCA ATGGAGTTGA TAAAAATCAT TGTAGTTTCT       1320
CAGTTCCTGA AGATAGATTA AGGCACCGTG ATGAACGTAT GCACAGCTTC CAAATCAATA       1380
ATAACATAGA TCTCATTATA GAGTCAAATT CATGCTCCAG TGATGTGTTT AGGGCTAGCA       1440
ACAGTGATTC AGCCATCTTT CACTCAGATG CATACAAGCA GGATAGATGG TTAGATGATA       1500
ATGGCTATAA CAGGGAAGTT ATAGATTCCT TGAGGATATC TGATGCACCA GAAGCAGATT       1560
TTGTTGATGG AACCAAATCC AACAGTGTGG TTGCCAGCAA AGATCGAGTC TCTGAATGGC       1620
TTTGGACACT GCACCGAATT GTGGTTGATG TGGTTAGAAC GGATAGTCAT CTTGATTTCT       1680
ATGGAGAATC AAGAAATATG GCTAGGATGT CAGATATACT TGCAGTTTAT GCATGGGTTG       1740
ATCCTTCCAC CGGGTATTGC CAAGGTATGA GTGATCTACT TTCACCTTTT GTTGTTCTCT       1800
ATGAGGATGA TGCAGATGCC TTTTGGTGCT TTGAGATGCT ACTGAGAAGG ATGCGTGAAA       1860
ATTTCCAGAT GGAGGGACCA ACAGGAGTTA TGAAGCAGTT GCAAGCATTG TGGAAGATCA       1920
TGGAAATAAC TGATGTAGAA TTATTTGAAC ATTTGTCAAC AATTGGTGCT GAAAGCCTTC       1980
ATTTTGCTTT CCGGATGCTG CTAGTGCTTT TTCGTCGAGA GCTGTCCTTT GAGGAGTCAC       2040
TTAGCATGTG GGAGATGATG TGGGCTGCTG ACTTTAATGA AGATGTGATT TTACATTTGG       2100
AAGAGAATTG TCTGGAGCCA TTGCTGGTAG ATATGAGGAA TGATTTATCA TGTGAGGTGA       2160
AAGAAGAGCA CCGGGTGAAC AGTTACACAA GAAGAAAGTC CAAAAGCAGG AAGCCCCATC       2220
ATAGAAATGG TGAAATGCGT GTAGCTTGCA ACCTTGGAAT GAAACCCAAT ACAAGAAATC       2280
CCCTCTGTGG CTTGTCAGGA GCTACTATTT GGGCAAGACA TCAGCAGATG CCACATATAA       2340
GCACAAATGT GTTAGCAAAG AATGGAGATG ATGATCTGCC TATATTCTGC GTAGCAGCAA       2400
TCCTTGTAAT CAATCGCCAC AAGATAATTA GAGAAACTCG CTCAATAGAT GATGCAATCA       2460
AGATGTTCAA TGATAATATG CTGAAGATCA ATGTAAAAAG ATGCGTACGC ATGGCTATCA       2520
AGCTGAGGAA GAAGTATATT TACAAGTTAT TGAAGGGGGG CTCGGAATGA TGAAAAAGTG       2580
GAAACTGAAG TTGAGAAATC GCCCTGGGGA ACTAGATGTT TTTCAACCAT GAACTTCTCG       2640
TAATTATGGG TGATGGAACT TTATATATTC ATTAGAAGTC CAAAAAAAAT CCGTATACTC       2700
ACGGGAATCT GTACATATGC ACAGTATACT TGAAAACAAG AGACGAAGCG GTGGAAGGAT       2760
AATAGAGAAG ACCGCCATGT TGGTGTAGCA TCGATCGATG TTGTCATTGT TTTTGTGGTG       2820
CCAGCCCATC TGCCTTGGCA CTTTCCGTGG TGATTTCTGA TAAAAGTGGA GTACTAGTTG       2880
TTTTTTCTTT TTGCCAAACA ATTTGCGTCA GCTATTGGTG GAGAGAGAAG GAATGAATGA       2940
GGAATGTGTA TAAAGCACTA GTGGTAATCA CGCAGTCGTT TCAATACAGA ACAGTAAAAA       3000
ATGGAGGAAT TCTGCCA                                                      3017

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