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Sample: Contig15430_at  (Affymetrix GeneChip: Hordeum vulgare Genome Barley1 Array Feature)

Genotype (Genotype)
  species: Hordeum vulgare
  type: wildtype
  common name: barley

Gene function:
2 (MapMan)
MapMan Annotation:
BIN  4.11: glycolysis.phosphoglycerate mutase
BIN  4: glycolysis

Gene expression results, fold change ≥ |2|
Seed germination and development
   SEED DEVELOPMENT 16DAF ENDOSPERM vs SEED DEVELOPMENT 4DAF ENDOSPERM
   SEED DEVELOPMENT 25DAF EMBRYO vs SEED DEVELOPMENT 16DAF EMBRYO
   SEED DEVELOPMENT 25DAF ENDOSPERM vs SEED DEVELOPMENT 4DAF ENDOSPERM
   SEED GERMINATION 48H EMBRYO vs SEED GERMINATION 0H EMBRYO
   SEED GERMINATION 72H EMBRYO vs SEED GERMINATION 0H EMBRYO
   SEED GERMINATION 72H ENDOSPERM vs SEED GERMINATION 0H ENDOSPERM

Related with
LOC_Os03g21260.1 annotated gene (MSU6.1)
 
Sequence: Contig15430_at
submitter of sequence: public data
length: 1508
description: BEST BLASTX NR: 10/29/02 Q42908 e-102 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) 
Contig15430_at
gggctagtga acatggagcc aagaggatac gggttcatat ccttacggac ggtcgcgacg         60
tattggatgg cagcagtgtc acattcgtgg agacgcttga gaatgatctg gcaaagttac        120
gggacaaggg cgttgacgca agaattgcat ctggtggagg caggatgtat gttacaatgg        180
accgctatga gaatgattgg caagttgtga agcgtggttg ggatgcccag gttcttggtg        240
aagccccaca caagttttcc aaatggccat gaagccgtga aaaggctgag ggatgatccc        300
aaggcgaatg accagtattt accccccttc gtcgtcgtcg atgaaagcgg gaacccggtc        360
gggcccatag tggatggaga cgctgttgtg acatttaact tcagagctga tcgaatggtg        420
atgcttgcga aggcgctaga gtacgaggat ttcgacaaat tcgaccgtgt cagattcccc        480
aaggttcgct atgctggtat gcttcagtat gacggcgaac tgaagctgcc aagtcattac        540
cttgttgctc ccccggagat cgagaggacg tccggtgagt acctggcgca caatggcgta        600
cgcatctacg cttgcagcga gactgtgaaa tttggtcatg tcaccttttt ctggaacggg        660
aaccggtcgg gctgcttcaa cccaaacctc gagaaatacg aagaaattcc aagtgacact        720
ggtatagcct ttaatgaaca gccaagaatg aaggccgtgg aagttgcaga aaacgcacgg        780
ggtgccatcc taagtggcaa atttgatcag gtacgggtaa acatcccgaa tggagacatg        840
gttgggcaca caggtgacct tgaagccacc atcgttgggt gcaaggccgc tgatgaagcc        900
gtcaagatta ttcttgacgc catcgaacaa gtaggcggca tcttcgtggt caccgcagac        960
catggcaatg ccgaggacat ggtgaaaaga gacaaatccg ggaaaccaat tcgcgacaaa       1020
gacgggaatg tgcagcccct tacctcgcac acactgaatc cagtccccat cgccatcgga       1080
ggtccagggc ttgcgccagg ggctggattc cggaaggacc ttccggatgc cgggctcgct       1140
aacgttgcgg ccacactcat caacctccat ggttttgagg cccctcgtca ctatgagcca       1200
actcttatcc aagtctctgg cgcctccctt ctgaatcctt catctgcccc tccccttccc       1260
tttctctaag tcgctgctgg atacctgtga tgggcacggc catgcttatg tgtgcagtag       1320
taaataaatg tccacctggg ctcacctatg tatttttttt cttccctttg aatggactga       1380
tgtccaccac ttctgtctgt atctatgtgt ggcgtgatcg tatgcggttg cggtgtctat       1440
ttcgggcctc tttttcctgg gtagaggttt gttgaaaaag catttcagat caaaaaaaaa       1500
aaaaaaaa                                                                1508
TypePositionDescription
Oligo 885 - 909: GGCCGCTGATGAAGCCGTCAAGATT
Oligo 905 - 929: AGATTATTCTTGACGCCATCGAACA
Oligo 929 - 953: AAGTAGGCGGCATCTTCGTGGTCAC
Oligo 1019 - 1043: AAGACGGGAATGTGCAGCCCCTTAC
Oligo 1193 - 1217: ATGAGCCAACTCTTATCCAAGTCTC
Oligo 1259 - 1283: CCTTTCTCTAAGTCGCTGCTGGATA
Oligo 1278 - 1302: TGGATACCTGTGATGGGCACGGCCA
Oligo 1295 - 1319: CACGGCCATGCTTATGTGTGCAGTA
Oligo 1334 - 1358: ACCTGGGCTCACCTATGTATTTTTT
Oligo 1390 - 1414: CTTCTGTCTGTATCTATGTGTGGCG
Oligo 1415 - 1439: TGATCGTATGCGGTTGCGGTGTCTA
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