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Gene: LOC_Os01g01410.2


  Alternative name:LOC_Os01g01410
  Alternative name:12001.m42592

Genotype (Genotype)
  species: Oryza sativa japonica
  name: (Japanese rice)
  type: wildtype

Gene function:
leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed (TIGR 5.0)

Gene Ontology
GO termIdentifierType
response to endogenous stimulusGO:0009719biological process
protein modification processGO:0006464biological process
signal transductionGO:0007165biological process
protein bindingGO:0005515molecular function
kinase activityGO:0016301molecular function
carbohydrate bindingGO:0030246molecular function
nucleotide bindingGO:0000166molecular function
plasma membraneGO:0005886cellular component
cytoplasmGO:0005737cellular component
nucleusGO:0005634cellular component
membraneGO:0016020cellular component
cell wallGO:0005618cellular component

Related with
HI04L10 cDNA clone
HI01H07 cDNA clone

Orthologues and co-orthologues identified by INPARANOID
AT1G52310.1 Arabidopsis thaliana
LOC_Os01g01410.1 Oryza sativa japonica

External resources
Michigan State University - Rice Genome Annotation
Aramemnon
Gramene
PlnTFDB
iHOP (LOC_Os01g01410)
iHOP (12001.m42592)
 
Sequence: LOC_Os01g01410.2
submitter of sequence: public data
length: 1665
description: coding sequence (TIGR 5.0) 
LOC_Os01g01410.2
ATGGCGGCGG CCATCCTCCG CTTCTTCTTC TTCTTCTTCT TCTTCATCCT GCCCGCCTCC         60
CTCACCGCCA CCGCCTCCAC CTCCACCTCA TCATGCCCTG ATGGTTGGCA AATCACTCCT        120
GCTCTCGACA AGTGTTTCAT CTACATACCT ACACCCCTTT CTTGGGACAG ATCCGAGGCT        180
CTCTGCCGCA ACAACTTCAC CGCTCATTTG GCTGCCCTAT CATCACTTCA AGACCTCAAT        240
CTTGCAAAGT CTCTCTGTGG ACCTTCCCCC TCTGGATGCT GGGTCGGAGG TCATCGCAAC        300
AACACTGCCT CGGCTTTTGC TTGGAAATGG TCCGATGATT CATCTTCTTG GAATGATACT        360
GCCTTCCCTG CTGACCCATT GCGCGCCAAC TGCAGCACTA CTGGGTGTGC TCTTGCTACC        420
ACCAATGATG CATGCACTTT GGTTACCAAT ACCCATGCCG CACTTACCGC AAAAAGATGC        480
AGCGACTCAC ATGGACTCAT CTGTATGATC AATCATGACC GATGCTACCA TGATCACTGC        540
CACAAGGAGT ATTTCATAGT GCTCGTCGTT GTAAGCGGAT TCATTCTCTT GACCACTCTA        600
GCAGTAGTAG TTTGGCTACT TGTCTATAGG CGAAGCAAGA GGAGGAGAAG ATCGCGTGAA        660
GGTTCCAGTA CTTCAGCTAC CGCGTTAGTT CCACCGCTAT GGAAAGTGTT CACCAGTGAA        720
GAACTTAGAT CAATCACAAA GAACTTCAGT GAGGGCAACC GGCTTCCTGG GAATGCAAAG        780
ACTGGTGGAA CCTATAGCGG AATTTTGCCA GATGGATCCA GAGTAGCAAT CAAGAGGCTG        840
AAGAGATCAA GCCTACAAAG GAAAAAAGAT TTCTACTCTG AGATTGGGAG AGTTGCAAAG        900
CTGTATCATC CTAATTTAGT TGCAGTAAAA GGATGTTGTT ACGATCATGG TGACCGCTTT        960
ATTGTTTATG AGTTTGTTGC CAATGGGCCG TTGGATGTTT GGCTACATCA TGTCCCTAGA       1020
GGAGGGCGGT GCCTTGATTG GCCAATGAGG ATGAGAGTTG CTACAACTCT TGCACAAGGG       1080
ATCGCATTTT TGCATGACAA GGTGAAGCCG CAGGTCGTGC ACCGTGATAT CCGTGCAAGC       1140
AACGTGCTAC TTGACGAGGA ATTTGGTTCC CATCTGATGG GGGTTGGGCT GTCCAAGTTT       1200
GTACCATGGG AAGTAATGCA CGAGAGGACT GTGAAGGCTG CAACCTATGG GTACCTTGCT       1260
CCTGAATTCA TATACAGGAA TGAACTGACA ACAAAGAGCG ATGTCTACAG CTTTGGTGTG       1320
CTCCTTCTAG AGATCATCAG TGGCCGTCGG CCTACTCAGT CTGTCGAGTC TGTTGGATGG       1380
CAGACTATAT TTGAGTGGGC AACACCTCTA GTCCAGTCAC ACCGGTACCT AGAGCTGTTA       1440
GACCCACTGA TTCAGGAGTT GCCAGATGTA GGTGTCATCC AGAAAGTTGT TGACTTGGTC       1500
TATGCCTGCA CCCAGCATGT CCCTTCGGTG CGACCAAGGA TGTCTCATGT GGTCCATCAG       1560
CTCCAGCAAC TTGAGCTAAA GTCAGCAGCA TCAGAACAAC TGAGCGGCAC AAGCACTAGC       1620
GCTACATCTC CAATGTTACC ATTGGAGGTT CGGACTCCTC GCTGA                       1665
 
Sequence: LOC_Os01g01410.2
submitter of sequence: public data
length: 2486
description: cdna sequence (TIGR 5.0)
Sequence features and Clone alignments (BLAST):
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Gene structure   UTR    start codon    stop codon    exon-exon border 
Clone alignments   forward    reverse    start    stop 
Protein domains   domain       
Click on sequence features to obtain additional information.
 
LOC_Os01g01410.2
ACCTCTACTC CATTCCTCTT TCTTTGTTCA TCATCAAGGA AGGAAGGGCA AGGCCGCAAG         60
GGAAGACACG GATCGGCGGC CATGGCGGCG GCCATCCTCC GCTTCTTCTT CTTCTTCTTC        120
TTCTTCATCC TGCCCGCCTC CCTCACCGCC ACCGCCTCCA CCTCCACCTC ATCATGCCCT        180
GATGGTTGGC AAATCACTCC TGCTCTCGAC AAGTGTTTCA TCTACATACC TACACCCCTT        240
TCTTGGGACA GATCCGAGGC TCTCTGCCGC AACAACTTCA CCGCTCATTT GGCTGCCCTA        300
TCATCACTTC AAGACCTCAA TCTTGCAAAG TCTCTCTGTG GACCTTCCCC CTCTGGATGC        360
TGGGTCGGAG GTCATCGCAA CAACACTGCC TCGGCTTTTG CTTGGAAATG GTCCGATGAT        420
TCATCTTCTT GGAATGATAC TGCCTTCCCT GCTGACCCAT TGCGCGCCAA CTGCAGCACT        480
ACTGGGTGTG CTCTTGCTAC CACCAATGAT GCATGCACTT TGGTTACCAA TACCCATGCC        540
GCACTTACCG CAAAAAGATG CAGCGACTCA CATGGACTCA TCTGTATGAT CAATCATGAC        600
CGATGCTACC ATGATCACTG CCACAAGGAG TATTTCATAG TGCTCGTCGT TGTAAGCGGA        660
TTCATTCTCT TGACCACTCT AGCAGTAGTA GTTTGGCTAC TTGTCTATAG GCGAAGCAAG        720
AGGAGGAGAA GATCGCGTGA AGGTTCCAGT ACTTCAGCTA CCGCGTTAGT TCCACCGCTA        780
TGGAAAGTGT TCACCAGTGA AGAACTTAGA TCAATCACAA AGAACTTCAG TGAGGGCAAC        840
CGGCTTCCTG GGAATGCAAA GACTGGTGGA ACCTATAGCG GAATTTTGCC AGATGGATCC        900
AGAGTAGCAA TCAAGAGGCT GAAGAGATCA AGCCTACAAA GGAAAAAAGA TTTCTACTCT        960
GAGATTGGGA GAGTTGCAAA GCTGTATCAT CCTAATTTAG TTGCAGTAAA AGGATGTTGT       1020
TACGATCATG GTGACCGCTT TATTGTTTAT GAGTTTGTTG CCAATGGGCC GTTGGATGTT       1080
TGGCTACATC ATGTCCCTAG AGGAGGGCGG TGCCTTGATT GGCCAATGAG GATGAGAGTT       1140
GCTACAACTC TTGCACAAGG GATCGCATTT TTGCATGACA AGGTGAAGCC GCAGGTCGTG       1200
CACCGTGATA TCCGTGCAAG CAACGTGCTA CTTGACGAGG AATTTGGTTC CCATCTGATG       1260
GGGGTTGGGC TGTCCAAGTT TGTACCATGG GAAGTAATGC ACGAGAGGAC TGTGAAGGCT       1320
GCAACCTATG GGTACCTTGC TCCTGAATTC ATATACAGGA ATGAACTGAC AACAAAGAGC       1380
GATGTCTACA GCTTTGGTGT GCTCCTTCTA GAGATCATCA GTGGCCGTCG GCCTACTCAG       1440
TCTGTCGAGT CTGTTGGATG GCAGACTATA TTTGAGTGGG CAACACCTCT AGTCCAGTCA       1500
CACCGGTACC TAGAGCTGTT AGACCCACTG ATTCAGGAGT TGCCAGATGT AGGTGTCATC       1560
CAGAAAGTTG TTGACTTGGT CTATGCCTGC ACCCAGCATG TCCCTTCGGT GCGACCAAGG       1620
ATGTCTCATG TGGTCCATCA GCTCCAGCAA CTTGAGCTAA AGTCAGCAGC ATCAGAACAA       1680
CTGAGCGGCA CAAGCACTAG CGCTACATCT CCAATGTTAC CATTGGAGGT TCGGACTCCT       1740
CGCTGAAATC CACTGCTAGA GGAAAACCAA TTCAGTAGTT TCCGATGTCA GTCAGCTGGC       1800
AGCACATCTA TTGAAGTGTC TGCTTAACTA GTACTAGGAG AAGTACTTGA GGGGAGAAGT       1860
TAGGACCCCC ATAGGCCAAA CCAAATTAAC CTTTGTGTAG CAATGGGCTG TTTGTTGTTA       1920
AAATGGTCAT TGCCCATGTG TACTTGAGTT GGCCTCTATG TAGAAGATAT CAGTTTAGTG       1980
AGCACAAATT TCTGAATGGT TGTAATAGTG ACCTTATCTA TATATCTACA TTTGATAGAA       2040
GGTGTGATAA TATCTTCCTG TCTCTATACA TGGGACTGTA GTAAAAAGGG CAGCAAGCTA       2100
GGTAGCTGCA GTGGGCTTCC GCCTGAGCTT GTTGAAGGTG GGTCTCAGAG GTTGGCTTGC       2160
GCTGGGTTCA AATGGCAGCA ATGGCTTCTT GATCTGTGTT CCGGCTCCAA TGCTGGACGC       2220
TGGTGGTGGT GGAGTTGTGT TGCTGTTGCC GGTGCGTGTG CTGGTGGTAG CCCTCTGCTT       2280
CTTTGCCCTG GGAGCTTCCA GCCTCTCCAG AATCCTGCTT GTCTTGTCGT CCAGGCCCAG       2340
CGGTTTCACT GGGGACGGCA GCTTGGGGTT GGCCCTAGAA GTAGAACATG TGACGGCACT       2400
GGTGAAGTCG TCGTCGATGA TGATAAGCTG TTCCCACTCC TCGGTGATGC TGGGCCTGGG       2460
CGACGCCTTC TCCTTTGACG CTGCCT                                            2486
 
Sequence: LOC_Os01g01410
submitter of sequence: public data
length: 3897
description: genomic sequence (TIGR 5.0) 
LOC_Os01g01410
ACCTCTACTC CATTCCTCTT TCTTTGTTCA TCATCAAGGA AGGAAGGGCA AGGCCGCAAG         60
GGAAGACACG GATCGGCGGC CATGGCGGCG GCCATCCTCC GCTTCTTCTT CTTCTTCTTC        120
TTCTTCATCC TGCCCGCCTC CCTCACCGCC ACCGCCTCCA CCTCCACCTG TATGTATTCC        180
CTCCTCGCCT CGCCTGCCTC ATAGGAGTAC TACTTTCTTT CTCTACTGCT TCTACTACAC        240
TTGACTAGAT CCCTACTACT CCAGTTAGTA CTAGGGGCGC TGCATCCATC ACTTCTTTCC        300
CTATCTCTCT CGCCAACCTC AACCTGCATG CATCTCTCTT CTATTTCTTC TTTCTACTCT        360
CCTTTTGCCC TTGCTTCCTC CCTCCTAATA ACTACTCTTC CACATCAATC TGTCTGTCAC        420
AAACAAGCAA CGAATTCCTC TCTTACATCT TCTTCTTCTT CTTCTACACT CGCACACAAA        480
TTTATATATA AAACAAGATT TCTTTTTTTT TCCCCGCCAC CTACACCCTT TCTTCGGCTA        540
CACTTTCTCC GCACGACCAT GTAAATGTAA TGGGGATACC ATTAGTATAT TATTAATAAT        600
TAATTTACGA CCTGTGTTGT GTTCATCCTC ATGTCTGTCA CACCTTCTTC TTTAACTTCA        660
CTATACTCTA CTGTCGTCCT TGTATCAGAT GCCAGGGTTC TCATTATTCA TACTTACTAC        720
CTTATTATTA TTATTATTAT TATTATTAAC TGCCACCCAT TTCTCTGCAG CATCATGCCC        780
TGATGGTTGG CAAATCACTC CTGCTCTCGA CAAGTGTTTC ATCTACATAC CTACACCCCT        840
TTCTTGGGAC AGATCCGAGG CTCTCTGCCG CAACAACTTC ACCGCTCATT TGGCTGCCCT        900
ATCATCACTT CAAGACCTCA ATCTTGCAAA GTCTCTCTGT GGACCTTCCC CCTCTGGATG        960
CTGGGTCGGA GGTCATCGCA ACAACACTGC CTCGGCTTTT GCTTGGAAAT GGTCCGATGA       1020
TTCATCTTCT TGGAATGATA CTGCCTTCCC TGCTGACCCA TTGCGCGCCA ACTGCAGCAC       1080
TACTGGGTGT GCTCTTGCTA CCACCAATGA TGCATGCACT TTGGTTACCA ATACCCATGC       1140
CGCACTTACC GCAAAAAGAT GCAGCGACTC ACATGGACTC ATCTGTATGA TCAATCATGG       1200
TGAGTATCCC TTTTGCTAAT ACTGGTGCCA TCTGTATAAT CTATTATCTC TTTATCACAA       1260
ATCATTATTT CCTCTCACCA TATGCAAATA TGTTTGTTCT GTACTGCTGA TCAACTCTAC       1320
TTTATGTCAG AAGACCGATG CTACCATGAT CACTGCCACA AGGAGTATTT CATAGTGCTC       1380
GTCGTTGTAA GCGGATTCAT TCTCTTGACC ACTCTAGCAG TAGTAGTTTG GCTACTTGTC       1440
TATAGGCGAA GCAAGAGGAG GAGAAGATCG CGTGAAGGTT CCAGTACTTC AGCTACCGCG       1500
TTAGTTCCAC CGCTATGGAA AGTGTTCACC AGTGAAGAAC TTAGATCAAT CACAAAGAAC       1560
TTCAGTGAGG GCAACCGGCT TCCTGGGAAT GCAAAGACTG GTGGAACCTA TAGCGGAATT       1620
TTGCCAGATG GATCCAGAGT AGCAATCAAG AGGCTGAAGA GATCAAGCCT ACAAAGGAAA       1680
AAAGATTTCT ACTCTGAGAT TGGGAGAGTT GCAAAGCTGT ATCATCCTAA TTTAGTTGCA       1740
GTAAAAGGAT GTTGTTACGA TCATGGTGAC CGCTTTATTG TTTATGAGTT TGTTGCCAAT       1800
GGGCCGTTGG ATGTTTGGCT ACATCATGTC CCTAGAGGAG GGCGGTGCCT TGATTGGCCA       1860
ATGAGGATGA GAGTTGCTAC AACTCTTGCA CAAGGGATCG CGTAAGTCAT CCTAGCCATC       1920
TGTACAGAAT CTTTGATTAC TTGCCTATTT TTCACAAACA TGTTACTCTA CTTCTTACTG       1980
AGATGTTTAG GTCCCTCTAA CATAGATCCA TGCATAAACC TAGCTTGCGT GCACTCGTGT       2040
GCATGCAGAT TTTTCGTACC GCTTGCATGC GCCTGCCTGC ACTAATTTAT ATCCAGACCT       2100
ATTTGGAACT CATTTGGGTT ACCATTTTAG GATGGTTTGT CTTTGCATTA AATTTCAAGG       2160
TTTCATTCAG AGTTTTGTTG TTTCCCGTCA TTCAGCTCCC ATGGTTGATC ATTATATGTT       2220
TTTGGTTGCT TATTAATTGA CACCGGTGGG CTGCATAAAT GTACGTGGTA GCATGCATGG       2280
GAAACCACTA AGTATACTTA CACTTTAATT ATGTCATAAT AAAGACAATT AGAGAAGCCA       2340
CCTGTTGTCT TACGGTTCTA TCGCTGCAGG TGCATGATTC TAGAGTTCTC GAATTATATT       2400
GATGGCTTCT ACATCCATAT AATCTTTTAA AGCTATATTA CTCAAGAGTG TTGTTTGGGT       2460
TCCCGTGGAA CTAAAATTAG GCCAAATGCG TATACGTCAA TGCAAGCCCT TATGGCGTTG       2520
TGTTTTGTTT TGCTACTATT AGTTGCTATT TACTTACCAG TGCTCATTTT GATCCAGATT       2580
TTTGCATGAC AAGGTGAAGC CGCAGGTCGT GCACCGTGAT ATCCGTGCAA GCAACGTGCT       2640
ACTTGACGAG GAATTTGGTT CCCATCTGAT GGGGGTTGGG CTGTCCAAGT TTGTACCATG       2700
GGAAGTAATG CACGAGAGGA CTGTGAAGGC TGCAACCTAT GGGTACCTTG CTCCTGAATT       2760
CATATACAGG AATGAACTGA CAACAAAGAG CGATGTCTAC AGCTTTGGTG TGCTCCTTCT       2820
AGAGATCATC AGTGGCCGTC GGCCTACTCA GTCTGTCGAG TCTGTTGGAT GGCAGACTAT       2880
ATTTGAGTGG GCAACACCTC TAGTCCAGTC ACACCGGTAC CTAGAGCTGT TAGACCCACT       2940
GATTCAGGAG TTGCCAGATG TAGGTGTCAT CCAGAAAGTT GTTGACTTGG TCTATGCCTG       3000
CACCCAGCAT GTCCCTTCGG TGCGACCAAG GATGTCTCAT GTGGTCCATC AGCTCCAGCA       3060
ACTTGAGCTA AAGTCAGCAG CATCAGAACA ACTGAGCGGC ACAAGCACTA GCGCTACATC       3120
TCCAATGTTA CCATTGGAGG TTCGGACTCC TCGCTGAAAT CCACTGCTAG AGGAAAACCA       3180
ATTCAGTAGT TTCCGATGTC AGTCAGCTGG CAGCACATCT ATTGAAGTGT CTGCTTAACT       3240
AGTACTAGGA GAAGTACTTG AGGGGAGAAG TTAGGACCCC CATAGGCCAA ACCAAATTAA       3300
CCTTTGTGTA GCAATGGGCT GTTTGTTGTT AAAATGGTCA TTGCCCATGT GTACTTGAGT       3360
TGGCCTCTAT GTAGAAGATA TCAGTTTAGT GAGCACAAAT TTCTGAATGG TTGTAATAGT       3420
GACCTTATCT ATATATCTAC ATTTGATAGA AGGTGTGATA ATATCTTCCT GTCTCTATAC       3480
ATGGGACTGT AGTAAAAAGG GCAGCAAGCT AGGTAGCTGC AGTGGGCTTC CGCCTGAGCT       3540
TGTTGAAGGT GGGTCTCAGA GGTTGGCTTG CGCTGGGTTC AAATGGCAGC AATGGCTTCT       3600
TGATCTGTGT TCCGGCTCCA ATGCTGGACG CTGGTGGTGG TGGAGTTGTG TTGCTGTTGC       3660
CGGTGCGTGT GCTGGTGGTA GCCCTCTGCT TCTTTGCCCT GGGAGCTTCC AGCCTCTCCA       3720
GAATCCTGCT TGTCTTGTCG TCCAGGCCCA GCGGTTTCAC TGGGGACGGC AGCTTGGGGT       3780
TGGCCCTAGA AGTAGAACAT GTGACGGCAC TGGTGAAGTC GTCGTCGATG ATGATAAGCT       3840
GTTCCCACTC CTCGGTGATG CTGGGCCTGG GCGACGCCTT CTCCTTTGAC GCTGCCT          3897
 
Sequence: LOC_Os01g01410.2
submitter of sequence: public data
length: 554
description: amino acid sequence (TIGR 5.0) 
LOC_Os01g01410.2
MAAAILRFFF FFFFFILPAS LTATASTSTS SCPDGWQITP ALDKCFIYIP TPLSWDRSEA         60
LCRNNFTAHL AALSSLQDLN LAKSLCGPSP SGCWVGGHRN NTASAFAWKW SDDSSSWNDT        120
AFPADPLRAN CSTTGCALAT TNDACTLVTN THAALTAKRC SDSHGLICMI NHDRCYHDHC        180
HKEYFIVLVV VSGFILLTTL AVVVWLLVYR RSKRRRRSRE GSSTSATALV PPLWKVFTSE        240
ELRSITKNFS EGNRLPGNAK TGGTYSGILP DGSRVAIKRL KRSSLQRKKD FYSEIGRVAK        300
LYHPNLVAVK GCCYDHGDRF IVYEFVANGP LDVWLHHVPR GGRCLDWPMR MRVATTLAQG        360
IAFLHDKVKP QVVHRDIRAS NVLLDEEFGS HLMGVGLSKF VPWEVMHERT VKAATYGYLA        420
PEFIYRNELT TKSDVYSFGV LLLEIISGRR PTQSVESVGW QTIFEWATPL VQSHRYLELL        480
DPLIQELPDV GVIQKVVDLV YACTQHVPSV RPRMSHVVHQ LQQLELKSAA SEQLSGTSTS        540
ATSPMLPLEV RTPR                                                          554
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