BLASTN 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= GabiPD|141349|Name:HR01B11u|Hordeum vulgare|Barke (414 letters) Database: All nt+env_nt+patnt+pdbnt 39,826,516 sequences; 43,083,979,091 total letters Score E Sequences producing significant alignments: (bits) value gb|GP685097.1| Sequence 36006 from patent US 7569389 371 3e-99 gb|EA153178.1| Sequence 17493 from patent US 7214786 371 3e-99 tpg|BK005645.1| TPA_inf: Triticum aestivum histidine-containin... 371 3e-99 gb|AY342358.1| Triticum aestivum histidine-containing phosphot... 351 3e-93 tpg|BK005644.1| TPA_inf: Triticum aestivum histidine-containin... 335 2e-88 gb|EA143573.1| Sequence 7888 from patent US 7214786 176 9e-41 gb|EA181858.1| Sequence 46173 from patent US 7214786 159 2e-35 gb|EA149028.1| Sequence 13343 from patent US 7214786 111 4e-21 gb|EA143489.1| Sequence 7804 from patent US 7214786 109 2e-20 emb|FP099014.1| Phyllostachys edulis cDNA clone: bphyst333z60,... 89.7 2e-14 emb|CT832141.1| Oryza sativa (indica cultivar-group) cDNA clon... 89.7 2e-14 ref|NM_001070496.1| Oryza sativa (japonica cultivar-group) Os0... 89.7 2e-14 gb|AY345241.1| Oryza sativa (japonica cultivar-group) two-comp... 89.7 2e-14 dbj|AK104879.1| Oryza sativa Japonica Group cDNA clone:001-044... 89.7 2e-14 dbj|AK072521.1| Oryza sativa Japonica Group cDNA clone:J023131... 89.7 2e-14 emb|AX654330.1| Sequence 4200 from Patent WO03000898 77.8 6e-11 >gb|GP685097.1| Sequence 36006 from patent US 7569389 Length = 870 Score = 371 bits (187), Expect = 3e-99 Identities = 225/237 (94%), Gaps = 3/237 (1%) Frame = +1 / -1 Query: 178 ggggtcacatggagctaagctccttctgcttcagtttttactgctactctacttgggact 237 ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 616 ggggtcacatggagctaagctccttttgcttcagtg---actgctactctacttgggact 560 Query: 238 gcaggcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcaca 297 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 559 gcaggcctcgatctgctgctccagctgcatcatggtctggaacttgttgcgcacatcaca 500 Query: 298 gaactcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcata 357 |||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| Sbjct: 499 gaactcactcctaacaagagccaacgccatgaggcacccttctttgctttttgcctcata 440 Query: 358 gaactggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactggagct 414 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 439 gaactggcggaagtgcatgcaggcgagcttcactttctgagcaccaacactcgagct 383 >gb|EA153178.1| Sequence 17493 from patent US 7214786 Length = 974 Score = 371 bits (187), Expect = 3e-99 Identities = 225/237 (94%), Gaps = 3/237 (1%) Frame = +1 / -1 Query: 178 ggggtcacatggagctaagctccttctgcttcagtttttactgctactctacttgggact 237 ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 624 ggggtcacatggagctaagctccttttgcttcagtg---actgctactctacttgggact 568 Query: 238 gcaggcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcaca 297 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 567 gcaggcctcgatctgctgctccagctgcatcatggtctggaacttgttgcgcacatcaca 508 Query: 298 gaactcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcata 357 |||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| Sbjct: 507 gaactcactcctaacaagagccaacgccatgaggcacccttctttcctttttgcctcata 448 Query: 358 gaactggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactggagct 414 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 447 gaactggcggaagtgcatgcaggcgagcttcactttctgagcaccaacactcgagct 391 >tpg|BK005645.1| TPA_inf: Triticum aestivum histidine-containing phosphotransfer protein 3 (HP) mRNA, complete cds Length = 931 Score = 371 bits (187), Expect = 3e-99 Identities = 225/237 (94%), Gaps = 3/237 (1%) Frame = +1 / -1 Query: 178 ggggtcacatggagctaagctccttctgcttcagtttttactgctactctacttgggact 237 ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 625 ggggtcacatggagctaagctccttttgcttcagtg---actgctactctacttgggact 569 Query: 238 gcaggcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcaca 297 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 568 gcaggcctcgatctgctgctccagctgcatcatggtctggaacttgttgcgcacatcaca 509 Query: 298 gaactcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcata 357 |||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| Sbjct: 508 gaactcactcctaacaagagccaacgccatgaggcacccttctttgctttttgcctcata 449 Query: 358 gaactggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactggagct 414 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 448 gaactggcggaagtgcatgcaggcgagcttcactttctgagcaccaacactcgagct 392 >gb|AY342358.1| Triticum aestivum histidine-containing phosphotransfer protein mRNA, complete cds Length = 775 Score = 351 bits (177), Expect = 3e-93 Identities = 234/252 (92%), Gaps = 7/252 (2%) Frame = +1 / -1 Query: 167 ccatcatgtcaggggtcacatggag----ctaagctccttctgcttcagtttttactgct 222 ||||||||||||||||||||||||| ||||||||||| |||||| ||| |||||| Sbjct: 542 ccatcatgtcaggggtcacatggagggagctaagctccttttgcttcggtt---actgct 486 Query: 223 actctacttgggactgcaggcctcgatctgctgccccagctgcatcatggtctggaactt 282 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 485 actctacttgggactgcaggcctcgatctgctgctccagctgcatcatggtctggaactt 426 Query: 283 gctgcgcacatcacagaactcactcctaacaagggccaacgccatgaggcacccatcttt 342 | ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| Sbjct: 425 gttgcgcacatcacagaactcactcctaacaagagccagcgccatgaggcacccttcttt 366 Query: 343 actttttgcctcatagaactggcggaagtgcatgcaggcgagcttcactttctgagcgcc 402 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 365 gctttttgcctcataaaactggcggaagtgcatgcaggcgagcttcactttctgagcacc 306 Query: 403 aacactggagct 414 |||||| ||||| Sbjct: 305 aacactcgagct 294 Score = 63.9 bits (32), Expect = 9e-07 Identities = 47/52 (90%) Frame = +1 / -1 Query: 39 aagttccgtttcaaggggtcgcgagcccggagttccaccgctggaatcggtc 90 |||||| |||||||||||||||||||| || ||||| |||| |||||||||| Sbjct: 680 aagttctgtttcaaggggtcgcgagcctggggttccgccgcgggaatcggtc 629 >tpg|BK005644.1| TPA_inf: Triticum aestivum histidine-containing phosphotransfer protein 2 (HP) mRNA, complete cds Length = 1212 Score = 335 bits (169), Expect = 2e-88 Identities = 232/252 (92%), Gaps = 7/252 (2%) Frame = +1 / -1 Query: 167 ccatcatgtcaggggtcacatggag----ctaagctccttctgcttcagtttttactgct 222 |||||||||||||||||||| |||| ||||||||||| |||||||||| |||||| Sbjct: 964 ccatcatgtcaggggtcacacggagggagctaagctccttttgcttcagtt---actgct 908 Query: 223 actctacttgggactgcaggcctcgatctgctgccccagctgcatcatggtctggaactt 282 ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 907 actctacttcggactgcacgcctcgatctgctgctccagctgcatcatggtctggaactt 848 Query: 283 gctgcgcacatcacagaactcactcctaacaagggccaacgccatgaggcacccatcttt 342 | ||||||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||| Sbjct: 847 gttgcgcacatcacagaactcgctcctaacaagagccagcgccatgaggcacccttcttt 788 Query: 343 actttttgcctcatagaactggcggaagtgcatgcaggcgagcttcactttctgagcgcc 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 787 gctttttgcctcatagaactggcggaagtgcatgcaggcgagcttcactttctgagcacc 728 Query: 403 aacactggagct 414 |||||| ||||| Sbjct: 727 aacactcgagct 716 >gb|EA143573.1| Sequence 7888 from patent US 7214786 Length = 842 Score = 176 bits (89), Expect = 9e-41 Identities = 149/169 (88%) Frame = +1 / -1 Query: 246 cgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaactcac 305 ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 513 cgatctgctgctccagctgcatcatggtctggaacttgtcgcgcacatcgcagaactcat 454 Query: 306 tcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaactggc 365 || ||| ||| |||||||||||||||||||| ||||| ||| |||||||| |||||| Sbjct: 453 tcgtaagaagagccaacgccatgaggcacccttctttgcttcttgcctcaatgaactgat 394 Query: 366 ggaagtgcatgcaggcgagcttcactttctgagcgccaacactggagct 414 ||||||||||||||| ||| |||||||||| ||| ||||||||| |||| Sbjct: 393 ggaagtgcatgcaggagaggttcactttcttagcaccaacactgcagct 345 >gb|EA181858.1| Sequence 46173 from patent US 7214786 Length = 407 Score = 159 bits (80), Expect = 2e-35 Identities = 116/127 (91%), Gaps = 7/127 (5%) Frame = +1 / -1 Query: 167 ccatcatgtcaggggtcacatggag----ctaagctccttctgcttcagtttttactgct 222 ||||||||||||||||||||||||| ||||||||||| |||||| ||| |||||| Sbjct: 124 ccatcatgtcaggggtcacatggagggagctaagctccttttgcttcggtt---actgct 68 Query: 223 actctacttgggactgcaggcctcgatctgctgccccagctgcatcatggtctggaactt 282 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 67 actctacttgggactgcaggcctcgatctgctgctccagctgcatcatggtctggaactt 8 Query: 283 gctgcgc 289 | ||||| Sbjct: 7 gttgcgc 1 Score = 63.9 bits (32), Expect = 9e-07 Identities = 47/52 (90%) Frame = +1 / -1 Query: 39 aagttccgtttcaaggggtcgcgagcccggagttccaccgctggaatcggtc 90 |||||| |||||||||||||||||||| || ||||| |||| |||||||||| Sbjct: 262 aagttctgtttcaaggggtcgcgagcctggggttccgccgcgggaatcggtc 211 >gb|EA149028.1| Sequence 13343 from patent US 7214786 Length = 784 Score = 111 bits (56), Expect = 4e-21 Identities = 132/156 (84%), Gaps = 1/156 (0%) Frame = +1 / -1 Query: 260 agctgcatcatggtctggaacttgctgcgcacatcacagaactcactcctaacaagggcc 319 ||||||||||| | || ||||||||| ||||| |||||||||||||||| | |||| ||| Sbjct: 468 agctgcatcatagcctcgaacttgcttcgcacctcacagaactcactccaagcaagagcc 409 Query: 320 aacg-ccatgaggcacccatctttactttttgcctcatagaactggcggaagtgcatgca 378 |||| |||||||||||| ||||| ||| ||| ||||| |||| | ||||| |||||||| Sbjct: 408 aacgcccatgaggcacctttctttgcttcttggctcattgaaccgacggaattgcatgca 349 Query: 379 ggcgagcttcactttctgagcgccaacactggagct 414 || || |||||||||| ||| ||||||||| |||| Sbjct: 348 ggacaggttcactttcttagcaccaacactgtagct 313 >gb|EA143489.1| Sequence 7804 from patent US 7214786 Length = 889 Score = 109 bits (55), Expect = 2e-20 Identities = 76/83 (91%) Frame = +1 / -1 Query: 227 tacttgggactgcaggcctcgatctgctgccccagctgcatcatggtctggaacttgctg 286 ||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||||| || Sbjct: 478 tacttaggactgcaggcctcgatttgctgctccagatgcatcatggtctggaacttgttg 419 Query: 287 cgcacatcacagaactcactcct 309 ||||||||| |||||||| |||| Sbjct: 418 cgcacatcatagaactcattcct 396 >emb|FP099014.1| Phyllostachys edulis cDNA clone: bphyst333z60, full insert sequence Length = 951 Score = 89.7 bits (45), Expect = 2e-14 Identities = 138/169 (81%) Frame = +1 / -1 Query: 242 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 301 |||| ||| |||||| ||||||| | ||| |||||||||||| |||||| |||| ||||| Sbjct: 524 gcctggatttgctgctccagctgaagcatagtctggaacttgttgcgcagatcatagaac 465 Query: 302 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 361 ||| | || |||| ||||| ||||||||||||||||| | ||||| ||| | |||| Sbjct: 464 tcatttctgacaacagccaataccatgaggcacccatctctgcttttctcctgacagaat 405 Query: 362 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactgg 410 || ||||| |||||||| | | |||||||||||| || |||||||||| Sbjct: 404 tgacggaactgcatgcaagtaaacttcactttctgcgcaccaacactgg 356 >emb|CT832141.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA040M21, full insert sequence Length = 862 Score = 89.7 bits (45), Expect = 2e-14 Identities = 138/169 (81%) Frame = +1 / -1 Query: 242 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 301 |||| ||| |||||| ||||||| | ||| ||||| |||||| |||||| |||| |||| Sbjct: 524 gcctggatttgctgctccagctgaagcatagtctgaaacttgttgcgcagatcatagaag 465 Query: 302 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 361 || | || |||| ||||| ||||| |||||||||||| | ||||| ||| | ||||| Sbjct: 464 tcgtttctcacaacagccaatgccataaggcacccatctctgcttttgtcctgacagaac 405 Query: 362 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactgg 410 || ||||| |||||||| | || ||||||||||||||| |||||||||| Sbjct: 404 tgacggaactgcatgcaagtgaacttcactttctgagcaccaacactgg 356 >ref|NM_001070496.1| Oryza sativa (japonica cultivar-group) Os09g0567400 (Os09g0567400) mRNA, complete cds Length = 1004 Score = 89.7 bits (45), Expect = 2e-14 Identities = 138/169 (81%) Frame = +1 / -1 Query: 242 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 301 |||| ||| |||||| ||||||| | ||| ||||| |||||| |||||| |||| |||| Sbjct: 524 gcctggatttgctgctccagctgaagcatagtctgaaacttgttgcgcagatcatagaag 465 Query: 302 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 361 || | || |||| ||||| ||||| |||||||||||| | ||||| ||| | ||||| Sbjct: 464 tcgtttctcacaacagccaatgccataaggcacccatctctgcttttgtcctgacagaac 405 Query: 362 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactgg 410 || ||||| |||||||| | || ||||||||||||||| |||||||||| Sbjct: 404 tgacggaactgcatgcaagtgaacttcactttctgagcaccaacactgg 356 >gb|AY345241.1| Oryza sativa (japonica cultivar-group) two-component phosphorelay mediator HP1 mRNA, complete cds Length = 450 Score = 89.7 bits (45), Expect = 2e-14 Identities = 138/169 (81%) Frame = +1 / -1 Query: 242 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 301 |||| ||| |||||| ||||||| | ||| ||||| |||||| |||||| |||| |||| Sbjct: 428 gcctggatttgctgctccagctgaagcatagtctgaaacttgttgcgcagatcatagaag 369 Query: 302 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 361 || | || |||| ||||| ||||| |||||||||||| | ||||| ||| | ||||| Sbjct: 368 tcgtttctcacaacagccaatgccataaggcacccatctctgcttttgtcctgacagaac 309 Query: 362 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactgg 410 || ||||| |||||||| | || ||||||||||||||| |||||||||| Sbjct: 308 tgacggaactgcatgcaagtgaacttcactttctgagcaccaacactgg 260 >dbj|AK104879.1| Oryza sativa Japonica Group cDNA clone:001-044-F01, full insert sequence Length = 900 Score = 89.7 bits (45), Expect = 2e-14 Identities = 138/169 (81%) Frame = +1 / -1 Query: 242 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 301 |||| ||| |||||| ||||||| | ||| ||||| |||||| |||||| |||| |||| Sbjct: 448 gcctggatttgctgctccagctgaagcatagtctgaaacttgttgcgcagatcatagaag 389 Query: 302 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 361 || | || |||| ||||| ||||| |||||||||||| | ||||| ||| | ||||| Sbjct: 388 tcgtttctcacaacagccaatgccataaggcacccatctctgcttttgtcctgacagaac 329 Query: 362 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactgg 410 || ||||| |||||||| | || ||||||||||||||| |||||||||| Sbjct: 328 tgacggaactgcatgcaagtgaacttcactttctgagcaccaacactgg 280 >dbj|AK072521.1| Oryza sativa Japonica Group cDNA clone:J023131B06, full insert sequence Length = 1005 Score = 89.7 bits (45), Expect = 2e-14 Identities = 138/169 (81%) Frame = +1 / -1 Query: 242 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 301 |||| ||| |||||| ||||||| | ||| ||||| |||||| |||||| |||| |||| Sbjct: 525 gcctggatttgctgctccagctgaagcatagtctgaaacttgttgcgcagatcatagaag 466 Query: 302 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 361 || | || |||| ||||| ||||| |||||||||||| | ||||| ||| | ||||| Sbjct: 465 tcgtttctcacaacagccaatgccataaggcacccatctctgcttttgtcctgacagaac 406 Query: 362 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactgg 410 || ||||| |||||||| | || ||||||||||||||| |||||||||| Sbjct: 405 tgacggaactgcatgcaagtgaacttcactttctgagcaccaacactgg 357 >emb|AX654330.1| Sequence 4200 from Patent WO03000898 Length = 555 Score = 77.8 bits (39), Expect = 6e-11 Identities = 114/139 (82%) Frame = +1 / -1 Query: 272 gtctggaacttgctgcgcacatcacagaactcactcctaacaagggccaacgccatgagg 331 ||||| |||||| |||||| |||| |||| || | || |||| ||||| ||||| ||| Sbjct: 398 gtctgaaacttgttgcgcagatcatagaagtcgtttctcacaacagccaatgccataagg 339 Query: 332 cacccatctttactttttgcctcatagaactggcggaagtgcatgcaggcgagcttcact 391 ||||||||| | ||||| ||| | ||||||| ||||| |||||||| | || ||||||| Sbjct: 338 cacccatctctgcttttgtcctgacagaactgacggaactgcatgcaagtgaacttcact 279 Query: 392 ttctgagcgccaacactgg 410 |||||||| |||||||||| Sbjct: 278 ttctgagcaccaacactgg 260 Database: All nt+env_nt+patnt+pdbnt Posted date: Mar 31, 2010 11:15 PM Number of letters in database: 43,083,979,091 Number of sequences in database: 39,826,516 Matrix: Search Statistics
