BLASTN 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= GabiPD|223294|Name:HA03A23u|Hordeum vulgare|Barke (348 letters) Database: All nt+env_nt+patnt+pdbnt 39,826,516 sequences; 43,083,979,091 total letters Score E Sequences producing significant alignments: (bits) value gb|EA161421.1| Sequence 25736 from patent US 7214786 287 3e-74 gb|EA186970.1| Sequence 51285 from patent US 7214786 220 6e-54 gb|EA186981.1| Sequence 51296 from patent US 7214786 212 1e-51 ref|NM_001157340.1| Zea mays pectinesterase inhibitor domain c... 133 1e-27 ref|XM_002442420.1| Sorghum bicolor hypothetical protein, mRNA 125 2e-25 ref|XM_002443444.1| Sorghum bicolor hypothetical protein, mRNA 79.8 1e-11 >gb|EA161421.1| Sequence 25736 from patent US 7214786 Length = 726 Score = 287 bits (145), Expect = 3e-74 Identities = 163/169 (96%) Frame = +1 / -1 Query: 180 atgatcgaccttgttgagcagcgccgtggccatggtggtgagctggtcgaactcgcggtt 239 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 569 atgatcgaccctgttgagcagcgcggtggccatggtggtgagctggtcgaactcgcggtt 510 Query: 240 ggcggcggccatcctccccttggccgccggcgcgccggcgagcgccgcctcgcagccgat 299 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 ggccgcggccatcctccccttggccgccggcgcgccggcgagcgccgcctcgcagccgat 450 Query: 300 cccggcctgccccgtgagcgagagcattgagcgcgcccggtcccacgcc 348 ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 449 cccggcctgccccgtgagcgacagcagcgagcgcgcccggtcccacgcc 401 >gb|EA186970.1| Sequence 51285 from patent US 7214786 Length = 583 Score = 220 bits (111), Expect = 6e-54 Identities = 132/139 (94%) Frame = +1 / -1 Query: 210 catggtggtgagctggtcgaactcgcggttggcggcggccatcctccccttggccgccgg 269 ||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 583 catggtgctgagctggtcaaactcgcggttggcggcggccatcctccccttggcctccgg 524 Query: 270 cgcgccggcgagcgccgcctcgcagccgatcccggcctgccccgtgagcgagagcattga 329 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| || Sbjct: 523 cgcgccggcgagcgccgcctcgcagccgatcccggcctgcccggtgagcgacagcagcga 464 Query: 330 gcgcgcccggtcccacgcc 348 ||||||||||||||||||| Sbjct: 463 gcgcgcccggtcccacgcc 445 >gb|EA186981.1| Sequence 51296 from patent US 7214786 Length = 479 Score = 212 bits (107), Expect = 1e-51 Identities = 164/183 (89%) Frame = +1 / +1 Query: 166 ccacgtcacccgagatgatcgaccttgttgagcagcgccgtggccatggtggtgagctgg 225 ||||||||||| || |||||||| ||||||||||||| | |||||||| | |||||||| Sbjct: 171 ccacgtcacccctgacgatcgaccctgttgagcagcgcgggggccatggggctgagctgg 230 Query: 226 tcgaactcgcggttggcggcggccatcctccccttggccgccggcgcgccggcgagcgcc 285 || ||||||||||||| || ||||||||||||||||||| ||||||||||||| |||||| Sbjct: 231 tcaaactcgcggttggggggggccatcctccccttggcctccggcgcgccggcaagcgcc 290 Query: 286 gcctcgcagccgatcccggcctgccccgtgagcgagagcattgagcgcgcccggtcccac 345 |||||| ||||||||||||||||||| | |||||| |||| |||||||||||||||||| Sbjct: 291 gcctcgaagccgatcccggcctgcccggggagcgacagcagcgagcgcgcccggtcccac 350 Query: 346 gcc 348 ||| Sbjct: 351 gcc 353 >ref|NM_001157340.1| Zea mays pectinesterase inhibitor domain containing protein (LOC100284445), mRNAgb|EU968396.1| Zea mays clone 320346 pectinesterase inhibitor domain containing protein mRNA, complete cds Length = 854 Score = 133 bits (67), Expect = 1e-27 Identities = 112/127 (88%) Frame = +1 / -1 Query: 193 ttgagcagcgccgtggccatggtggtgagctggtcgaactcgcggttggcggcggccatc 252 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 581 ttgaggagcgccgtggccatggtggagagctggtcgaactcgcggttggcggcggccatc 522 Query: 253 ctccccttggccgccggcgcgccggcgagcgccgcctcgcagccgatcccggcctgcccc 312 | ||||||||| || | ||| | |||||| || ||||| |||||||||||||| ||| Sbjct: 521 cgggccttggccggcgcggagcccgtgagcgcggcgtcgcacccgatcccggcctggccc 462 Query: 313 gtgagcg 319 ||||||| Sbjct: 461 gtgagcg 455 >ref|XM_002442420.1| Sorghum bicolor hypothetical protein, mRNA Length = 552 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Frame = +1 / -1 Query: 189 cttgttgagcagcgccgtggccatggtggtgagctggtcgaactcgcggttggcggcggc 248 ||||||||| | ||| ||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 534 cttgttgaggaacgcggtggccatggtggagagctggtcgaactcgcggttagcggcggc 475 Query: 249 catcctccccttggccgccggcgcgccggcgagcgccgcctcgcagccgatcccggcctg 308 ||||| | ||||||||| || | ||| ||||||| || ||||| |||||||||||||| Sbjct: 474 catccgcgccttggccgtcgcagagccctcgagcgcggcgtcgcacccgatcccggcctg 415 Query: 309 ccccgtgagcg 319 |||||||||| Sbjct: 414 tcccgtgagcg 404 >ref|XM_002443444.1| Sorghum bicolor hypothetical protein, mRNA Length = 414 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/67 (91%), Gaps = 2/67 (2%) Frame = +1 / -1 Query: 189 cttgttgagcagcgccgtggccatggt--ggtgagctggtcgaactcgcggttggcggcg 246 |||||||| ||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct: 399 cttgttgaagagcgcggtggccatggtatggagagctggtcgaactcgcggttggcggcg 340 Query: 247 gccatcc 253 ||||||| Sbjct: 339 gccatcc 333 Database: All nt+env_nt+patnt+pdbnt Posted date: Mar 31, 2010 09:17 AM Number of letters in database: 43,083,979,091 Number of sequences in database: 39,826,516 Matrix: Search Statistics
