BLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= GabiPD|141045|Name:HR01B11r|Hordeum vulgare|Barke (225 letters) Database: UniGeneDec2009.fasta 658,415 sequences; 586,174,781 total letters Score E Sequences producing significant alignments: (bits) value GabiPD|5935455|Name:Hv.8009|Hordeum vulgare gnl|UG|Hv#S1252661... 285 1e-75 GabiPD|6276586|Name:Zm.223|Zea mays gnl|UG|Zm#S50705611 Zea ma... 91.7 3e-17 GabiPD|6037334|Name:Os.4702|Oryza sativa gnl|UG|Os#S16405485 O... 77.8 4e-13 GabiPD|6043757|Name:Os.16444|Oryza sativa gnl|UG|Os#S35448013 ... 67.9 4e-10 GabiPD|6360470|Name:Zm.142210|Zea mays gnl|UG|Zm#S48294145 Zea... 60.0 1e-07 GabiPD|6343625|Name:Zm.123028|Zea mays gnl|UG|Zm#S48239951 312... 60.0 1e-07 GabiPD|6197261|Name:Sbi.11896|Sorghum bicolor gnl|UG|Sbi#S2299... 60.0 1e-07 >GabiPD|5935455|Name:Hv.8009|Hordeum vulgare gnl|UG|Hv#S12526615 HVSMEb0001F22f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0001F22f, mRNA sequence /clone=HVSMEb0001F22f /gb=BF626799 /gi=13088255 /ug=Hv.8009 /len=827 Length = 827 Score = 285 bits (144), Expect = 1e-75 Identities = 144/144 (100%) Frame = +1 / +1 Query: 66 gcggaccccaggacctccggatcggagccccacgcgcctcgccatggcggccaacgcgct 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100 gcggaccccaggacctccggatcggagccccacgcgcctcgccatggcggccaacgcgct 159 Query: 126 ccaggcccagctcaacgcgctcctcgcctccatgttcgccacgggtatggtggacgacca 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 ccaggcccagctcaacgcgctcctcgcctccatgttcgccacgggtatggtggacgacca 219 Query: 186 gttccagcagctgcagtcgctgga 209 |||||||||||||||||||||||| Sbjct: 220 gttccagcagctgcagtcgctgga 243 >GabiPD|6276586|Name:Zm.223|Zea mays gnl|UG|Zm#S50705611 Zea mays full-length cDNA clone ZM_BFb0140I17 mRNA, complete cds /cds=m(295,675) /gb=BT061373 /gi=223943972 /ug=Zm.223 /len=1048 Length = 1048 Score = 91.7 bits (46), Expect = 3e-17 Identities = 61/66 (92%) Frame = +1 / +1 Query: 136 ctcaacgcgctcctcgcctccatgttcgccacgggtatggtggacgaccagttccagcag 195 |||||||| |||||| |||||||||||||| ||||| |||||||||| |||||||||||| Sbjct: 370 ctcaacgctctcctctcctccatgttcgcctcgggtctggtggacgagcagttccagcag 429 Query: 196 ctgcag 201 |||||| Sbjct: 430 ctgcag 435 >GabiPD|6037334|Name:Os.4702|Oryza sativa gnl|UG|Os#S16405485 Oryza sativa Japonica Group cDNA clone:J023131B06, full insert sequence /cds=p(191,547) /gb=AK072521 /gi=32982544 /ug=Os.4702 /len=1005 Length = 1005 Score = 77.8 bits (39), Expect = 4e-13 Identities = 81/95 (85%) Frame = +1 / +1 Query: 107 ccatggcggccaacgcgctccaggcccagctcaacgcgctcctcgcctccatgttcgcca 166 ||||||||||| ||| |||| | |||||||| ||| |||||| ||||||||||| || Sbjct: 96 ccatggcggccgccgctctccgcgaccagctcaccgctctcctctcctccatgttctccc 155 Query: 167 cgggtatggtggacgaccagttccagcagctgcag 201 |||| |||||||||| |||||||||||||||||| Sbjct: 156 agggtttggtggacgagcagttccagcagctgcag 190 >GabiPD|6043757|Name:Os.16444|Oryza sativa gnl|UG|Os#S35448013 CT862376 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone CONTIG5017, mRNA sequence /clone=CONTIG5017 /gb=CT862376 /gi=117240614 /ug=Os.16444 /len=1171 Length = 1171 Score = 67.9 bits (34), Expect = 4e-10 Identities = 43/46 (93%) Frame = +1 / +1 Query: 156 catgttcgccacgggtatggtggacgaccagttccagcagctgcag 201 ||||||||||| |||| || |||||||||||||||||||||||||| Sbjct: 405 catgttcgccatgggtttgctggacgaccagttccagcagctgcag 450 >GabiPD|6360470|Name:Zm.142210|Zea mays gnl|UG|Zm#S48294145 Zea mays clone 1703696 hypothetical protein mRNA, complete cds /cds=p(289,507) /gb=EU958571 /gi=195617717 /ug=Zm.142210 /len=729 Length = 729 Score = 60.0 bits (30), Expect = 1e-07 Identities = 42/46 (91%) Frame = +1 / +1 Query: 136 ctcaacgcgctcctcgcctccatgttcgccacgggtatggtggacg 181 |||||||| |||||| |||||||||||||| ||||| ||||||||| Sbjct: 316 ctcaacgctctcctctcctccatgttcgcctcgggtctggtggacg 361 >GabiPD|6343625|Name:Zm.123028|Zea mays gnl|UG|Zm#S48239951 31263104 CERES-502 Zea mays cDNA clone 1703696 3', mRNA sequence /clone=1703696 /clone_end=3' /gb=FL446498 /gi=211015456 /ug=Zm.123028 /len=718 Length = 718 Score = 60.0 bits (30), Expect = 1e-07 Identities = 42/46 (91%) Frame = +1 / +1 Query: 136 ctcaacgcgctcctcgcctccatgttcgccacgggtatggtggacg 181 |||||||| |||||| |||||||||||||| ||||| ||||||||| Sbjct: 306 ctcaacgctctcctctcctccatgttcgcctcgggtctggtggacg 351 >GabiPD|6197261|Name:Sbi.11896|Sorghum bicolor gnl|UG|Sbi#S22998873 GABR1_15_F03.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_15_F03_A002 5', mRNA sequence /clone=GABR1_15_F03_A002 /clone_end=5' /gb=CX614700 /gi=57813469 /ti=963893666 /ug=Sbi.11896 /len=706 Length = 706 Score = 60.0 bits (30), Expect = 1e-07 Identities = 39/42 (92%) Frame = +1 / +1 Query: 156 catgttcgccacgggtatggtggacgaccagttccagcagct 197 |||||||||||||||| || | |||||||||||||||||||| Sbjct: 123 catgttcgccacgggtttgcttgacgaccagttccagcagct 164 Database: UniGeneDec2009.fasta Posted date: Dec 14, 2009 06:58 PM Number of letters in database: 586,174,781 Number of sequences in database: 658,415 Matrix: Search Statistics
