BLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= GabiPD|943348|Name:BES1824103h19|Hordeum vulgare|Barke (733 letters) Database: Oryza sativa japonica annotation TIGR 6.1 (cDNA)20091211 67,393 sequences; 114,587,937 total letters Score E Sequences producing significant alignments: (bits) value GabiPD|6648079|Name:LOC_Os03g16690.1|Oryza sativa japonica cdn... 379 1e-104 >GabiPD|6648079|Name:LOC_Os03g16690.1|Oryza sativa japonica cdna sequence (MSU 6.1) Length = 2033 Score = 379 bits (191), Expect = 1e-104 Identities = 477/571 (83%), Gaps = 1/571 (0%) Frame = +1 / +1 Query: 21 tggagagatggtcttgacaaatctgacaactggagacaaagctgtgctgtatttccagcc 80 |||||||||||| |||||||| ||||||||||||||||||| |||||| | |||||||| Sbjct: 1087 tggagagatggtattgacaaacctgacaactggagacaaagttgtgcttttattccagcc 1146 Query: 81 atgcggctggtttggggctggccgattcgaggtggatgggtatgtatatactgcagctga 140 ||| ||||||||||||||||| || | |||||||||||| ||||| |||| ||||||||| Sbjct: 1147 atgtggctggtttggggctggtcggtacgaggtggatggctatgtgtatagtgcagctga 1206 Query: 141 agaaccgaaaataatgatgacaggaaaatggaacaagtccatgagttaccagccttgtga 200 |||||| ||||||||||| || ||||| |||||| |||||||||||| ||||| || || Sbjct: 1207 agaacccaaaataatgataactggaaagtggaaccagtccatgagttgtcagccatgcga 1266 Query: 201 tcaagaaggtgatcctcttccagggacggagctaaaagaggtctggaaagccgctcctgc 260 ||||||||| |||||||||||||| || |||||||| ||| | |||| || |||||| | Sbjct: 1267 tcaagaaggcgatcctcttccaggaactgagctaaaggagatatggagagttgctcctac 1326 Query: 261 tccaccgagtgacaagtaccagtatacatactttgcacacaaaataaatagctttgatac 320 |||||| | ||||||||||||||| || |||| || ||||||||||| ||||| ||||| Sbjct: 1327 tccaccaaatgacaagtaccagtacacgcacttcgcgcacaaaataaacagcttcgatac 1386 Query: 321 agcacctaagaagctcttgccttcagactcccgattaaggcccgacagatatgcccttga 380 || || |||||||| ||| | || ||||||||||| ||||| || ||||||||||| || Sbjct: 1387 ggcgccgaagaagctattggcatcggactcccgattgaggcctgatagatatgccctcga 1446 Query: 381 gaagggcgacatgtctaaatctggggcacataagagcaggcttgaagaacaacaacgagc 440 |||||| |||||||| ||||| || || | ||||||||||||||||| |||||| |||| Sbjct: 1447 gaagggtgacatgtcaaaatcaggttcagaaaagagcaggcttgaagagcaacaaagagc 1506 Query: 441 cgagaagaaaatccgggacaccaaggggggagaagttcactccaaaatggttcaagatga 500 ||||| | || || || |||| ||||||| | || ||||||| |||||| || | || Sbjct: 1507 tgagaaaagaacacgagaggccaa-gggggagcaatttactccaagatggtttaacagga 1565 Query: 501 cggaagacatctcccctaccccgtggggcgacctggaggtgtacgagtacaacggcagat 560 | || || ||| ||||||| || |||||||| ||||| ||||| || ||||| || | || Sbjct: 1566 ccgatgaaatcgcccctacaccctggggcgagctggaagtgtatgaatacaatggaaaat 1625 Query: 561 acaccgagcaccgggccgcgatagacagctc 591 ||||||||||||| || || || |||||||| Sbjct: 1626 acaccgagcaccgcgctgccattgacagctc 1656 Database: Oryza sativa japonica annotation TIGR 6.1 (cDNA)20091211 Posted date: Dec 14, 2009 09:36 AM Number of letters in database: 114,587,937 Number of sequences in database: 67,393 Matrix: Search Statistics
