BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 943348|597 (733 letters) Database: non redundant GenBank CDS translations \+ PDB \+ SwissProt \+ PIR 2,870,162 sequences; 997,129,685 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA97478.1| oxysterol-binding protein [Arabidopsis thaliana] 269 6e-71 ref|XP_638977.1| hypothetical protein DDB0185641 [Dictyostelium ... 104 2e-21 ref|XP_708707.1| PREDICTED: similar to oxysterol-binding protein... 103 5e-21 ref|XP_505514.1| hypothetical protein [Yarrowia lipolytica] >gi|... 102 2e-20 ref|XP_855711.1| PREDICTED: similar to oxysterol binding protein... 101 3e-20 ref|XP_855683.1| PREDICTED: similar to oxysterol-binding protein... 101 3e-20 ref|XP_537881.2| PREDICTED: similar to oxysterol-binding protein... 101 3e-20 ref|XP_687289.1| PREDICTED: similar to oxysterol-binding protein... 101 3e-20 ref|XP_708708.1| PREDICTED: similar to oxysterol-binding protein... 101 3e-20 ref|XP_708706.1| PREDICTED: similar to oxysterol-binding protein... 101 3e-20 >dbj|BAA97478.1| oxysterol-binding protein [Arabidopsis thaliana] Length = 453 Score = 269 bits (688), Expect = 6e-71 Identities = 122/156 (78%), Positives = 140/156 (89%) Frame = +1 Query: 1 RTWVDSFGEMVLTNLTTGDKAVLYFQPCGWFGAGRFEVDGYVYTAAEEPKIMMTGKWNKS 180 RTWVDS GEMV+TNLTTGDK VLYFQPCGWFG+GR+EVDGYVY+AAEEPKIMMTGKWN+ Sbjct: 232 RTWVDSPGEMVMTNLTTGDKVVLYFQPCGWFGSGRYEVDGYVYSAAEEPKIMMTGKWNEK 291 Query: 181 MSYQPCDQEGDPLPGTELKEVWKAAPAPPSDKYQYTYFAHKINSFDTAPKKLLPSDSRLR 360 MSYQPCD EG+PLPGTELKEVW A P +D +QYT+FAHKINSFDTAP KLL SDSR+R Sbjct: 292 MSYQPCDAEGEPLPGTELKEVWHLADVPKNDNFQYTHFAHKINSFDTAPAKLLASDSRIR 351 Query: 361 PDRYALEKGDMSKSGAHKSRLEEQQRAEKKIRDTKG 468 PDRY+LE+GD+SK+G+ K LEE+QRAEK+ R+TKG Sbjct: 352 PDRYSLEQGDLSKAGSEKHSLEERQRAEKRTRETKG 387 Score = 79.0 bits (193), Expect = 1e-13 Identities = 36/95 (37%), Positives = 53/95 (55%) Frame = +2 Query: 362 PTDMPLRRATCLNLGHIRAGLKNNNEPRRKSGTPRGEKFTPKWFKMTEDISPTPWGDLEV 541 P L + G + L+ +++ +G+KFTP+WF +T++I+PTPWGD+EV Sbjct: 352 PDRYSLEQGDLSKAGSEKHSLEERQRAEKRTRETKGQKFTPRWFDLTDEITPTPWGDIEV 411 Query: 542 YEYNGRYTEHRAAIDSSXXXXXXXXXTXASIEXNP 646 Y+YNG+Y EHR +SS SIE NP Sbjct: 412 YQYNGKYNEHRDTAESS--SSASNETDLKSIEFNP 444 >ref|XP_638977.1| hypothetical protein DDB0185641 [Dictyostelium discoideum] gb|EAL65621.1| hypothetical protein DDBDRAFT_0185641 [Dictyostelium discoideum AX4] Length = 402 Score = 104 bits (260), Expect = 2e-21 Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 3/159 (1%) Frame = +1 Query: 7 WVDSFGEMVLTNLTTGDKAVLYFQPCGWFGAGRFEVDGYVYTAAEEPKIMMTGKWNKSMS 186 W+D +G++V+ N TTG KAVL F GW GAGR+ V G + + + +TGKWN+S+ Sbjct: 209 WLDHYGDLVIENHTTGSKAVLKFAKSGWLGAGRYGVTGEIVDCEGDVRYRITGKWNESIQ 268 Query: 187 -YQPCDQEGDPLPGTELKEVWKAAPAPPSDKYQY-TYFAHKINSFDTAPKKLLP-SDSRL 357 +Q D T L W+A+ P ++K+ + + + + KK+LP +DSRL Sbjct: 269 LFQVMDNGSSSTTSTCL---WEASKEPINNKFLFPRWVEENVIDLNDEYKKILPVTDSRL 325 Query: 358 RPDRYALEKGDMSKSGAHKSRLEEQQRAEKKIRDTKGGE 474 R DR ALE+G++ + K LEE+QR +K+ R + E Sbjct: 326 RADRIALEEGNLDVAAKEKHNLEEKQREDKRQRVAENKE 364 >ref|XP_708707.1| PREDICTED: similar to oxysterol-binding protein-like 1A isoform B isoform 4 [Danio rerio] Length = 1006 Score = 103 bits (257), Expect = 5e-21 Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 34/190 (17%) Frame = +1 Query: 7 WVDSFGEMVLTNLTTGDKAVLYFQPCGWFGAGRFEVDGYVYTAAEEPKIMMTGKWNKSM- 183 W++ +G + + N TG+K L F+PCG FG +V+GY+ +++ ++ GKW + M Sbjct: 780 WIEQYGNVEVINHRTGEKCCLNFKPCGLFGKELHKVEGYILDKSKKKVCVLYGKWTECMY 839 Query: 184 -----------------------SYQPCDQEGDPLPGTELKEV-------WKAAPAP--P 267 S Q D E P PG + EV W+ AP P Sbjct: 840 LVDPATFETHKKNDKKASEEKKSSKQSSDSEETPQPGGDSLEVIPGSQLLWRIAPRPANS 899 Query: 268 SDKYQYTYFAHKINSFDTAPKKLLP-SDSRLRPDRYALEKGDMSKSGAHKSRLEEQQRAE 444 + Y +T FA ++N D + ++P +DSRLRPD A+E GD+ + K RLEE+QRA Sbjct: 900 AQMYSFTSFALQLNELDKEIESVIPKTDSRLRPDIRAMENGDIDMASEEKKRLEEKQRAA 959 Query: 445 KKIRDTKGGE 474 +K R E Sbjct: 960 RKNRSKSDDE 969 >ref|XP_505514.1| hypothetical protein [Yarrowia lipolytica] emb|CAG78323.1| unnamed protein product [Yarrowia lipolytica CLIB122] Length = 1582 Score = 102 bits (253), Expect = 2e-20 Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 2/169 (1%) Frame = +1 Query: 10 VDSFGEMVLTNLTTGDKAVLYFQPCGWFGAGRFEVDGYVYTAAEEPKIMMTGKWNKSMSY 189 VD++G+M +TN TGD L+F+ GW GAG FEV G V P+ + G W++ Sbjct: 1394 VDNYGDMTITNHDTGDTCTLHFKARGWRGAGAFEVKGNVVDKNGNPQWTVGGHWHEKFYL 1453 Query: 190 QPCDQEGDPLPGTELKEV-WKAAPAPPSDKYQYTYFAHKINSF-DTAPKKLLPSDSRLRP 363 + G+E KEV W+ P PP+ + T FA +N+ D L P+D+RLRP Sbjct: 1454 KK--------HGSESKEVIWEVNPRPPA-PFNLTPFAITLNALPDRLKPWLAPTDTRLRP 1504 Query: 364 DRYALEKGDMSKSGAHKSRLEEQQRAEKKIRDTKGGEVHSKMVQDDGRH 510 D+ A+E+ + K+R+EE+QRA ++ R+ K GEV+ ++ +H Sbjct: 1505 DQRAMEEARYDDAATEKNRVEEKQRAARREREAK-GEVYKPRFFEEAKH 1552 >ref|XP_855711.1| PREDICTED: similar to oxysterol binding protein-like 1A isoform 3 [Canis familiaris] Length = 438 Score = 101 bits (251), Expect = 3e-20 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 37/189 (19%) Frame = +1 Query: 1 RTWVDSFGEMVLTNLTTGDKAVLYFQPCGWFGAGRFEVDGYVYTAAEEPKIMMTGKW--- 171 + W++ +G + +TN TGDK VL F+PCG FG +V+GY+ +++ + GKW Sbjct: 207 KLWIEQYGNVEITNHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTEC 266 Query: 172 ----------------------NKSMSYQPCDQEGDPLPGTELKEV---------WKAAP 258 K+ +E D +P + + V W+ AP Sbjct: 267 LYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFVIPGSVLLWRIAP 326 Query: 259 APP--SDKYQYTYFAHKINSFDTAPKKLLP-SDSRLRPDRYALEKGDMSKSGAHKSRLEE 429 PP + Y +T FA +N D + L+P +D RLRPD A+E G++ ++ K RLEE Sbjct: 327 RPPNSAQMYNFTSFAMVLNEVDKDMESLIPKTDCRLRPDIRAMENGEIDQASEEKKRLEE 386 Query: 430 QQRAEKKIR 456 +QRA +K R Sbjct: 387 KQRAARKNR 395 >ref|XP_855683.1| PREDICTED: similar to oxysterol-binding protein-like 1A isoform B isoform 2 [Canis familiaris] Length = 937 Score = 101 bits (251), Expect = 3e-20 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 37/189 (19%) Frame = +1 Query: 1 RTWVDSFGEMVLTNLTTGDKAVLYFQPCGWFGAGRFEVDGYVYTAAEEPKIMMTGKW--- 171 + W++ +G + +TN TGDK VL F+PCG FG +V+GY+ +++ + GKW Sbjct: 706 KLWIEQYGNVEITNHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTEC 765 Query: 172 ----------------------NKSMSYQPCDQEGDPLPGTELKEV---------WKAAP 258 K+ +E D +P + + V W+ AP Sbjct: 766 LYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFVIPGSVLLWRIAP 825 Query: 259 APP--SDKYQYTYFAHKINSFDTAPKKLLP-SDSRLRPDRYALEKGDMSKSGAHKSRLEE 429 PP + Y +T FA +N D + L+P +D RLRPD A+E G++ ++ K RLEE Sbjct: 826 RPPNSAQMYNFTSFAMVLNEVDKDMESLIPKTDCRLRPDIRAMENGEIDQASEEKKRLEE 885 Query: 430 QQRAEKKIR 456 +QRA +K R Sbjct: 886 KQRAARKNR 894 >ref|XP_537881.2| PREDICTED: similar to oxysterol-binding protein-like 1A isoform B isoform 1 [Canis familiaris] Length = 950 Score = 101 bits (251), Expect = 3e-20 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 37/189 (19%) Frame = +1 Query: 1 RTWVDSFGEMVLTNLTTGDKAVLYFQPCGWFGAGRFEVDGYVYTAAEEPKIMMTGKW--- 171 + W++ +G + +TN TGDK VL F+PCG FG +V+GY+ +++ + GKW Sbjct: 719 KLWIEQYGNVEITNHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTEC 778 Query: 172 ----------------------NKSMSYQPCDQEGDPLPGTELKEV---------WKAAP 258 K+ +E D +P + + V W+ AP Sbjct: 779 LYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFVIPGSVLLWRIAP 838 Query: 259 APP--SDKYQYTYFAHKINSFDTAPKKLLP-SDSRLRPDRYALEKGDMSKSGAHKSRLEE 429 PP + Y +T FA +N D + L+P +D RLRPD A+E G++ ++ K RLEE Sbjct: 839 RPPNSAQMYNFTSFAMVLNEVDKDMESLIPKTDCRLRPDIRAMENGEIDQASEEKKRLEE 898 Query: 430 QQRAEKKIR 456 +QRA +K R Sbjct: 899 KQRAARKNR 907 >ref|XP_687289.1| PREDICTED: similar to oxysterol-binding protein-like 1A isoform B isoform 1 [Danio rerio] Length = 963 Score = 101 bits (251), Expect = 3e-20 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 36/192 (18%) Frame = +1 Query: 7 WVDSFGEMVLTNLTTGDKAVLYFQPCGWFGAGRFEVDGYVYTAAEEPKIMMTGKWNKSM- 183 W++ +G + + N TG+K L F+PCG FG +V+GY+ +++ ++ GKW + M Sbjct: 735 WIEQYGNVEVINHRTGEKCCLNFKPCGLFGKELHKVEGYILDKSKKKVCVLYGKWTECMY 794 Query: 184 -------------------------SYQPCDQEGDPLPGTELKEV-------WKAAPAPP 267 Q D E P PG + EV W+ AP P Sbjct: 795 LVDPATFETHKKNDKKASEEKKSSKQSQSSDSEETPQPGGDSLEVIPGSQLLWRIAPRPA 854 Query: 268 SDK--YQYTYFAHKINSFDTAPKKLLP-SDSRLRPDRYALEKGDMSKSGAHKSRLEEQQR 438 + Y +T FA ++N D + ++P +DSRLRPD A+E GD+ + K RLEE+QR Sbjct: 855 NSAQMYSFTSFALQLNELDKEIESVIPKTDSRLRPDIRAMENGDIDMASEEKKRLEEKQR 914 Query: 439 AEKKIRDTKGGE 474 A +K R E Sbjct: 915 AARKNRSKSDDE 926 >ref|XP_708708.1| PREDICTED: similar to oxysterol-binding protein-like 1A isoform B isoform 5 [Danio rerio] Length = 960 Score = 101 bits (251), Expect = 3e-20 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 36/192 (18%) Frame = +1 Query: 7 WVDSFGEMVLTNLTTGDKAVLYFQPCGWFGAGRFEVDGYVYTAAEEPKIMMTGKWNKSM- 183 W++ +G + + N TG+K L F+PCG FG +V+GY+ +++ ++ GKW + M Sbjct: 732 WIEQYGNVEVINHRTGEKCCLNFKPCGLFGKELHKVEGYILDKSKKKVCVLYGKWTECMY 791 Query: 184 -------------------------SYQPCDQEGDPLPGTELKEV-------WKAAPAPP 267 Q D E P PG + EV W+ AP P Sbjct: 792 LVDPATFETHKKNDKKASEEKKSSKQSQSSDSEETPQPGGDSLEVIPGSQLLWRIAPRPA 851 Query: 268 SDK--YQYTYFAHKINSFDTAPKKLLP-SDSRLRPDRYALEKGDMSKSGAHKSRLEEQQR 438 + Y +T FA ++N D + ++P +DSRLRPD A+E GD+ + K RLEE+QR Sbjct: 852 NSAQMYSFTSFALQLNELDKEIESVIPKTDSRLRPDIRAMENGDIDMASEEKKRLEEKQR 911 Query: 439 AEKKIRDTKGGE 474 A +K R E Sbjct: 912 AARKNRSKSDDE 923 >ref|XP_708706.1| PREDICTED: similar to oxysterol-binding protein-like 1A isoform B isoform 3 [Danio rerio] Length = 950 Score = 101 bits (251), Expect = 3e-20 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 36/192 (18%) Frame = +1 Query: 7 WVDSFGEMVLTNLTTGDKAVLYFQPCGWFGAGRFEVDGYVYTAAEEPKIMMTGKWNKSM- 183 W++ +G + + N TG+K L F+PCG FG +V+GY+ +++ ++ GKW + M Sbjct: 722 WIEQYGNVEVINHRTGEKCCLNFKPCGLFGKELHKVEGYILDKSKKKVCVLYGKWTECMY 781 Query: 184 -------------------------SYQPCDQEGDPLPGTELKEV-------WKAAPAPP 267 Q D E P PG + EV W+ AP P Sbjct: 782 LVDPATFETHKKNDKKASEEKKSSKQSQSSDSEETPQPGGDSLEVIPGSQLLWRIAPRPA 841 Query: 268 SDK--YQYTYFAHKINSFDTAPKKLLP-SDSRLRPDRYALEKGDMSKSGAHKSRLEEQQR 438 + Y +T FA ++N D + ++P +DSRLRPD A+E GD+ + K RLEE+QR Sbjct: 842 NSAQMYSFTSFALQLNELDKEIESVIPKTDSRLRPDIRAMENGDIDMASEEKKRLEEKQR 901 Query: 439 AEKKIRDTKGGE 474 A +K R E Sbjct: 902 AARKNRSKSDDE 913 Database: non redundant GenBank CDS translations \+ PDB \+ SwissProt \+ PIR Posted date: May 19, 2006 3:38 PM Number of letters in database: 997,129,685 Number of sequences in database: 2,870,162 Lambda K H 0.315 0.133 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,455,542,373 Number of Sequences: 2870162 Number of extensions: 34270357 Number of successful extensions: 105887 Number of sequences better than 1.0e-08: 10 Number of HSP's better than 0.0 without gapping: 99761 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 105613 length of database: 997,129,685 effective HSP length: 125 effective length of database: 638,359,435 effective search space used: 75326413330 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
